Evidence map›Paper›PMID 31549767›Full record

ArticlePigment cell & melanoma research2020

A genome-wide CRISPR screen identifies FBXO42 involvement in resistance toward MEK inhibition in NRAS-mutant melanoma.

Adi Nagler, David W Vredevoogd, Michal Alon, Phil F Cheng, Sophie Trabish, Shelly Kalaora, Rand Arafeh, Victoria Goldin, Mitchell P Levesque, Daniel S Peeper and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Pigment cell & melanoma research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
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  6. NAR cancer · 2024
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  7. Article
  8. Review
  9. Review
  10. Article
  11. Review
  12. Review
  13. Many Distinct Ways Lead to Drug Resistance inLife (Basel, Switzerland) · 2021
    Review
  14. Review
  15. Novel insights into the pathogenesis and treatment of NRAS mutant melanoma.Expert review of precision medicine and drug development · 2021
    Article
  16. Visualization Analysis of CRISPR Gene-editing Knowledge Map based on Citespace.Biology bulletin of the Russian Academy of Sciences · 2021
    Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 3 countries.

Adi NaglerDepartment of Molecular Cell Biology, Weizmann Institute of Science, Rehovot, Israel.
David W VredevoogdDivision of Molecular Oncology and Immunology, The Netherlands Cancer Institute, Amsterdam, The Netherlands.
Michal AlonDepartment of Molecular Cell Biology, Weizmann Institute of Science, Rehovot, Israel.
Phil F ChengDepartment of Dermatology, University of Zurich Hospital, Zurich, Switzerland.
Sophie TrabishDepartment of Molecular Cell Biology, Weizmann Institute of Science, Rehovot, Israel.
Shelly KalaoraDepartment of Molecular Cell Biology, Weizmann Institute of Science, Rehovot, Israel.
Rand ArafehDepartment of Molecular Cell Biology, Weizmann Institute of Science, Rehovot, Israel.
Victoria GoldinDepartment of Molecular Cell Biology, Weizmann Institute of Science, Rehovot, Israel.
Mitchell P LevesqueDepartment of Dermatology, University of Zurich Hospital, Zurich, Switzerland.
Daniel S PeeperDivision of Molecular Oncology and Immunology, The Netherlands Cancer Institute, Amsterdam, The Netherlands.
Yardena SamuelsDepartment of Molecular Cell Biology, Weizmann Institute of Science, Rehovot, Israel.ORCID 0000-0002-3349-7266
Weizmann Institute of Science · ILThe Netherlands Cancer Institute · NLUniversity of Zurich · CH

Funding

European Research Council 712977European Research Council CoG- 770854
6 · The paper itself

Abstract

NRAS mutations are the most common alterations among RAS isoforms in cutaneous melanoma, with patients harboring these aggressive tumors having a poor prognosis and low survival rate. The main line of treatment for these patients is MAPK pathway-targeted therapies, such as MEK inhibitors, but, unfortunately, the response to these inhibitors is variable due to tumor resistance. Identifying genetic modifiers involved in resistance toward MEK-targeted therapy may assist in the development of new therapeutic strategies, enhancing treatment response and patient survival. Our whole-genome CRISPR-Cas9 knockout screen identified the target Kelch domain-containing F-Box protein 42 (FBXO42) as a factor involved in NRAS-mutant melanoma-acquired resistance to the MEK1/2 inhibitor trametinib. We further show that FBXO42, an E3 ubiquitin ligase, is involved in the TAK1 signaling pathway, possibly prompting an increase in active P38. In addition, we demonstrate that combining trametinib with the TAK1 inhibitor, takinib, is a far more efficient treatment than trametinib alone in NRAS-mutant melanoma cells. Our findings thus show a new pathway involved in NRAS-mutant melanoma resistance and provide new opportunities for novel therapeutic options.

Indexed as

Genome, HumanBase SequenceBiomarkers, TumorCell Line, TumorCRISPR-Cas SystemsDrug Resistance, NeoplasmF-Box ProteinsGenetic TestingGTP PhosphohydrolasesHumansMAP Kinase Kinase Kinase 7MAP Kinase Kinase KinasesMAP Kinase Signaling SystemMelanomaMembrane ProteinsMitogen-Activated Protein Kinase KinasesBiomarkers, TumorF-Box ProteinsFBXO42 protein, humanGTP PhosphohydrolasesMAP Kinase Kinase Kinase 7MAP Kinase Kinase KinasesMembrane ProteinsMitogen-Activated Protein Kinase KinasesNRAS protein, humanProtein Kinase InhibitorsPyridonesPyrimidinonestrametinibCRISPRmelanomaNRASresistancetherapy

Identifiers

PMID31549767
PMCPMC7383499
OpenAlexW2975506762

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.