Evidence map›Paper›PMID 31549420›Full record

ArticleThe New phytologist2019

MUR1-mediated cell-wall fucosylation is required for freezing tolerance in Arabidopsis thaliana.

Paige E Panter, Olivia Kent, Maeve Dale, Sarah J Smith, Mark Skipsey, Glenn Thorlby, Ian Cummins, Nathan Ramsay, Rifat A Begum, Dayan Sanhueza and 3 more

Open access · hybridAbstract read
In one paragraph

Article in The New phytologist, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
4.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 47 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 2 countries.

Paige E PanterDepartment of Biosciences & Durham Centre for Crop Improvement Technology, Durham University, South Road, Durham, DH1 3LE, UK.ORCID 0000-0002-0022-7817
Olivia KentDepartment of Biosciences & Durham Centre for Crop Improvement Technology, Durham University, South Road, Durham, DH1 3LE, UK.ORCID 0000-0002-9100-3930
Maeve DaleDepartment of Biosciences & Durham Centre for Crop Improvement Technology, Durham University, South Road, Durham, DH1 3LE, UK.
Sarah J SmithDepartment of Biosciences & Durham Centre for Crop Improvement Technology, Durham University, South Road, Durham, DH1 3LE, UK.
Mark SkipseyDepartment of Biosciences & Durham Centre for Crop Improvement Technology, Durham University, South Road, Durham, DH1 3LE, UK.
Glenn ThorlbyScion, 49 Sala Street, Private Bag 3020, Rotorua, 3046, New Zealand.ORCID 0000-0002-6742-900X
Ian CumminsDepartment of Biosciences & Durham Centre for Crop Improvement Technology, Durham University, South Road, Durham, DH1 3LE, UK.
Nathan RamsayDepartment of Biosciences & Durham Centre for Crop Improvement Technology, Durham University, South Road, Durham, DH1 3LE, UK.ORCID 0000-0002-5310-209X
Rifat A BegumInstitute of Molecular Plant Sciences, The University of Edinburgh, Daniel Rutherford Building, The King's Buildings, Max Born Crescent, Edinburgh, EH9 3BF, UK.
Dayan SanhuezaInstitute of Molecular Plant Sciences, The University of Edinburgh, Daniel Rutherford Building, The King's Buildings, Max Born Crescent, Edinburgh, EH9 3BF, UK.
Stephen C FryInstitute of Molecular Plant Sciences, The University of Edinburgh, Daniel Rutherford Building, The King's Buildings, Max Born Crescent, Edinburgh, EH9 3BF, UK.ORCID 0000-0002-1820-4867
Marc R KnightDepartment of Biosciences & Durham Centre for Crop Improvement Technology, Durham University, South Road, Durham, DH1 3LE, UK.ORCID 0000-0002-4830-8608
Heather KnightDepartment of Biosciences & Durham Centre for Crop Improvement Technology, Durham University, South Road, Durham, DH1 3LE, UK.ORCID 0000-0003-2047-6084
Durham University · GBUniversity of Edinburgh · GBScion · NZ

Funding

Biotechnology and Biological Sciences Research Council 1518540Biotechnology and Biological Sciences Research Council BB/H000690/1Biotechnology and Biological Sciences Research Council BB/J007331/1Biotechnology and Biological Sciences Research Council BB/M011186/1
6 · The paper itself

Abstract

Forward genetic screens play a key role in the identification of genes contributing to plant stress tolerance. Using a screen for freezing sensitivity, we have identified a novel freezing tolerance gene, SENSITIVE-TO-FREEZING8, in Arabidopsis thaliana. We identified SFR8 using recombination-based mapping and whole-genome sequencing. As SFR8 was predicted to have an effect on cell wall composition, we used GC-MS and polyacrylamide gel electrophoresis to measure cell-wall fucose and boron (B)-dependent dimerization of the cell-wall pectic domain rhamnogalacturonan II (RGII) in planta. After treatments to promote borate-bridging of RGII, we assessed freeze-induced damage in wild-type and sfr8 plants by measuring electrolyte leakage from freeze-thawed leaf discs. We mapped the sfr8 mutation to MUR1, a gene encoding the fucose biosynthetic enzyme GDP-d-mannose-4,6-dehydratase. sfr8 cell walls exhibited low cell-wall fucose levels and reduced RGII bridging. Freezing sensitivity of sfr8 mutants was ameliorated by B supplementation, which can restore RGII dimerization. B transport mutants with reduced RGII dimerization were also freezing-sensitive. Our research identifies a role for the structure and composition of the plant primary cell wall in determining basal plant freezing tolerance and highlights the specific importance of fucosylation, most likely through its effect on the ability of RGII pectin to dimerize.

Indexed as

ArabidopsisArabidopsis ProteinsBoronCell WallCloning, MolecularFreezingFucoseMutationPectinsPlant CellsStress, PhysiologicalArabidopsis ProteinsBoronFucosemur1 protein, ArabidopsisPectinsrhamnogalacturonan IIArabidopsis thalianaboroncell wallfreezing tolerancefucosepectinRhamnogalacturonan IIsfr8

Identifiers

PMID31549420
PMCPMC6899859
OpenAlexW2972254024

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.