Evidence map›Paper›PMID 31549372›Full record

ArticleMolecular biology reports2019

The effects of serum levels, and alterations in the genes of binding protein and receptor of vitamin D on gastric cancer.

Şermin Durak, Arezoo Gheybi, Şeyda Demirkol, Soykan Arıkan, Ş Ümit Zeybek, Filiz Akyüz, İlhan Yaylım, Özlem Küçükhüseyin

Abstract read
PubMed Publisher
In one paragraph

Article in Molecular biology reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 2 pooled it
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 2 syntheses or guidelines pooled it, 11 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Review
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Şermin DurakDepartment of Molecular Medicine, Aziz Sancar Institute of Experimental Medicine, Istanbul University, Vakif Gureba Ave., Capa, 34393, Istanbul, Turkey.ORCID http://orcid.org/0000-0001-6741-4345
Arezoo GheybiDepartment of Molecular Medicine, Aziz Sancar Institute of Experimental Medicine, Istanbul University, Vakif Gureba Ave., Capa, 34393, Istanbul, Turkey.ORCID http://orcid.org/0000-0002-6167-7571
Şeyda DemirkolDepartment of Molecular Medicine, Aziz Sancar Institute of Experimental Medicine, Istanbul University, Vakif Gureba Ave., Capa, 34393, Istanbul, Turkey.
Soykan ArıkanGeneral Surgery Clinics, Istanbul Educating and Training Hospital, Istanbul, Turkey.ORCID http://orcid.org/0000-0001-7132-6161
Ş Ümit ZeybekDepartment of Molecular Medicine, Aziz Sancar Institute of Experimental Medicine, Istanbul University, Vakif Gureba Ave., Capa, 34393, Istanbul, Turkey.ORCID http://orcid.org/0000-0001-8403-2939
Filiz AkyüzDepartment of Gastroenterology, Istanbul Faculty of Medicine, Istanbul University, Istanbul, Turkey.ORCID http://orcid.org/0000-0001-7498-141X
İlhan YaylımDepartment of Molecular Medicine, Aziz Sancar Institute of Experimental Medicine, Istanbul University, Vakif Gureba Ave., Capa, 34393, Istanbul, Turkey.ORCID http://orcid.org/0000-0003-2615-0202
Özlem KüçükhüseyinDepartment of Molecular Medicine, Aziz Sancar Institute of Experimental Medicine, Istanbul University, Vakif Gureba Ave., Capa, 34393, Istanbul, Turkey. ozlemkh@istanbul.edu.tr.ORCID http://orcid.org/0000-0001-6298-5026
Istanbul University · TRBiruni University · TR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Due to many biological cell functions of vitamin D including regulation of cell survival, proliferation and differentiation, the metabolism of itself gains importance in the development of several types of cancer. This case-control study was designed to evaluate the risk of gastric cancer development in terms of VDR rs2228570 & rs731236, and VDBP rs7041 polymorphisms, and serum levels of vitamin D. The study consists of 77 gastric cancer patients and 84 healthy individuals. VDR and VDBP gene polymorphisms and vitamin D levels were determined by using PCR-RFLP and HPLC methods. The distribution of VDR or VDBP gene variants were not different in study groups. The serum level of 25-hydroxyvitamin D was significantly lower in gastric cancer patients versus controls (16 ± 6 → 11 ± 6 ng/ml) in which male patients have higher levels than females. Although the whole study population lacks normal levels of 25-hydroxyvitamin D, it was found that the risk of the development of gastric cancer was approximately fourfold higher in cases with severe vitamin D (< 10 ng/ml) deficiency. Our results indicate that VDR rs731236 & rs2228570 or VDBP rs7041 polymorphisms were not risk factors for the development of gastric cancer individually, however, lower serum levels of vitamin D may be a contributory risk for both predisposition and development of gastric cancer.

Indexed as

Polymorphism, Single NucleotideCase-Control StudiesFemaleGenetic Predisposition to DiseaseHumansMaleMiddle AgedNeoplasm GradingReceptors, CalcitriolSex CharacteristicsStomach NeoplasmsVitamin DVitamin D-Binding ProteinGC protein, humanReceptors, CalcitriolVDR protein, humanVitamin DVitamin D-Binding ProteinGastric cancerPolymorphismVDBPVDRVitamin D

Identifiers

PMID31549372
OpenAlexW2975276100

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.