Evidence map›Paper›PMID 31549303›Full record

ArticleArchives of virology2019

Analysis of a novel RNA virus in a wild northern white-breasted hedgehog (Erinaceus roumanicus).

Gábor Reuter, Éva Várallyay, Dániel Baráth, Gábor Földvári, Sándor Szekeres, Ákos Boros, Beatrix Kapusinszky, Eric Delwart, Péter Pankovics

Open access · hybridAbstract read
In one paragraph

Article in Archives of virology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 7 institutions in 2 countries.

Gábor ReuterDepartment of Medical Microbiology and Immunology, Medical Center, University of Pécs, Szigeti út 12, Pecs, 7624, Hungary. reuter.gabor@gmail.com.
Éva VárallyayAgricultural Biotechnology Institute, National Agricultural Research and Innovation Centre, Gödöllő, Hungary.
Dániel BaráthAgricultural Biotechnology Institute, National Agricultural Research and Innovation Centre, Gödöllő, Hungary.
Gábor FöldváriEvolutionary Systems Research Group MTA Centre for Ecological Research, Tihany, Hungary.
Sándor SzekeresDepartment of Parasitology and Zoology, University of Veterinary Medicine, Budapest, Hungary.
Ákos BorosDepartment of Medical Microbiology and Immunology, Medical Center, University of Pécs, Szigeti út 12, Pecs, 7624, Hungary.
Beatrix KapusinszkyVitalant Research Institute, San Francisco, CA, USA.
Eric DelwartVitalant Research Institute, San Francisco, CA, USA.
Péter PankovicsDepartment of Medical Microbiology and Immunology, Medical Center, University of Pécs, Szigeti út 12, Pecs, 7624, Hungary.
University of Pecs · HUAgricultural Biotechnology Institute · HUHUN-REN Centre for Ecological Research · HUNational Agricultural Research and Innovation Centre · HUUniversity of California, San Francisco · USUniversity of Veterinary Medicine · HUVitalant · US

Funding

GINOP GINOP-2.3.2-15-2016-00057Hungarian Scientific Research Fund NKFIH/OTKA K111615
6 · The paper itself

Abstract

Tombusviruses are generally considered plant viruses. A novel tombus-/carmotetravirus-like RNA virus was identified in a faecal sample and blood and muscle tissues from a wild northern white-breasted hedgehog (Erinaceus roumanicus). The complete genome of the virus, called H14-hedgehog/2015/HUN (GenBank accession number MN044446), is 4,118 nucleotides in length with a readthrough stop codon of type/group 1 in ORF1 and lacks a poly(A) tract at the 3' end. The predicted ORF1-RT (RdRp) and the capsid proteins had low (31-33%) amino acid sequence identity to unclassified tombus-/noda-like viruses (Hubei tombus-like virus 12 and Beihai noda-like virus 10), respectively, discovered recently in invertebrate animals. An in vivo experimental plant inoculation study showed that an in vitro-transcribed H14-hedgehog/2015/HUN viral RNA did not replicate in Nicotiana benthamiana, Chenopodium quinoa, or Chenopodium murale, the most susceptible hosts for plant-origin tombusviruses.

Indexed as

AnimalsFecesGenome SizeGenome, ViralHedgehogsHost SpecificityMusclesPhylogenySequence Analysis, RNATombusvirus

Identifiers

PMID31549303
PMCPMC6823297
OpenAlexW2976256538

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.