Evidence map›Paper›PMID 31549182›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2020

Bin-based genome-wide association analyses improve power and resolution in QTL mapping and identify favorable alleles from multiple parents in a four-way MAGIC rice population.

Zhongmin Han, Gang Hu, Hua Liu, Famao Liang, Lin Yang, Hu Zhao, Qinghua Zhang, Zhixin Li, Qifa Zhang, Yongzhong Xing

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Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 28 citations in OpenAlex.

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  6. Adaptation to high latitudes through a novel allele of Hd3a strongly promoting heading date in rice.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
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  8. Haplotype mining panel for genetic dissection and breeding in Eucalyptus.The Plant journal : for cell and molecular biology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Zhongmin Han *National Key Laboratory of Crop Genetic Improvement, Huazhong Agriculture University, Wuhan, 430070, China.
Gang Hu *National Key Laboratory of Crop Genetic Improvement, Huazhong Agriculture University, Wuhan, 430070, China.
Hua LiuCollege of Agriculture, Yangtze University, Hubei Collaborative Innovation Center for Grain Industry, Jingzhou, 434000, China.
Famao LiangCollege of Agriculture, Yangtze University, Hubei Collaborative Innovation Center for Grain Industry, Jingzhou, 434000, China.
Lin YangNational Key Laboratory of Crop Genetic Improvement, Huazhong Agriculture University, Wuhan, 430070, China.
Hu ZhaoNational Key Laboratory of Crop Genetic Improvement, Huazhong Agriculture University, Wuhan, 430070, China.
Qinghua ZhangNational Key Laboratory of Crop Genetic Improvement, Huazhong Agriculture University, Wuhan, 430070, China.
Zhixin LiCollege of Agriculture, Yangtze University, Hubei Collaborative Innovation Center for Grain Industry, Jingzhou, 434000, China.
Qifa ZhangNational Key Laboratory of Crop Genetic Improvement, Huazhong Agriculture University, Wuhan, 430070, China.
Yongzhong XingNational Key Laboratory of Crop Genetic Improvement, Huazhong Agriculture University, Wuhan, 430070, China. yzxing@mail.hzau.edu.cn.ORCID http://orcid.org/0000-0003-1376-1514
Huazhong Agricultural University · CNYangtze University · CN

Funding

National Key Research and Development Program of China 2016YFD0100301National Natural Science Foundation of China 31701391National Natural Science Foundation of China 31821005
6 · The paper itself

Abstract

key messageA whole genome bin map was developed for a MAGIC population. Association studies for heading date at bin level exhibited powerful QTL mapping and identified favorable alleles. The presumed advantages of multiparent advanced generation intercross (MAGIC) population in quantitative trait locus (QTL) mapping were not fully utilized in the previous studies in which genome-wide association studies (GWAS) were conducted at only single nucleotide polymorphism level. In this study, we genotyped a rice four-way MAGIC population of 247 F

Indexed as

AllelesGenome-Wide Association StudyChromosome MappingChromosomes, PlantGenetics, PopulationHaplotypesOryzaPolymorphism, Single NucleotidePrincipal Component AnalysisQuantitative Trait LociRecombination, Genetic

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PMID31549182
OpenAlexW2976756466

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.