Evidence map›Paper›PMID 31548673›Full record

ArticleNature chemistry2019

A dual transacylation mechanism for polyketide synthase chain release in enacyloxin antibiotic biosynthesis.

Joleen Masschelein, Paulina K Sydor, Christian Hobson, Rhiannon Howe, Cerith Jones, Douglas M Roberts, Zhong Ling Yap, Julian Parkhill, Eshwar Mahenthiralingam, Gregory L Challis

Abstract read
In one paragraph

Article in Nature chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. No job too small for a giant enzyme.Nature chemical biology · 2023
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Biosynthesis of Chlorinated Lactylates inJournal of natural products · 2021
    Article
  17. Genomic Assemblies of Members ofMicrobiology resource announcements · 2020
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Joleen MasscheleinDepartment of Chemistry, University of Warwick, Coventry, UK.ORCID http://orcid.org/0000-0003-4366-3675
Paulina K SydorDepartment of Chemistry, University of Warwick, Coventry, UK.
Christian HobsonDepartment of Chemistry, University of Warwick, Coventry, UK.
Rhiannon HoweDepartment of Chemistry, University of Warwick, Coventry, UK.
Cerith JonesCardiff School of Biosciences, Cardiff University, Cardiff, UK.ORCID http://orcid.org/0000-0001-6275-0235
Douglas M RobertsDepartment of Chemistry, University of Warwick, Coventry, UK.
Zhong Ling YapCardiff School of Biosciences, Cardiff University, Cardiff, UK.
Julian ParkhillWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK.ORCID http://orcid.org/0000-0002-7069-5958
Eshwar MahenthiralingamCardiff School of Biosciences, Cardiff University, Cardiff, UK.ORCID http://orcid.org/0000-0001-9014-3790
Gregory L ChallisDepartment of Chemistry, University of Warwick, Coventry, UK. g.l.challis@warwick.ac.uk.ORCID http://orcid.org/0000-0001-5976-3545

Funding

Biotechnology and Biological Sciences Research Council BB/K002341/1Biotechnology and Biological Sciences Research Council BB/L021692/1Biotechnology and Biological Sciences Research Council BB/M017982/1
6 · The paper itself

Abstract

Polyketide synthases assemble diverse natural products with numerous important applications. The thioester intermediates in polyketide assembly are covalently tethered to acyl carrier protein domains of the synthase. Several mechanisms for polyketide chain release are known, contributing to natural product structural diversification. Here, we report a dual transacylation mechanism for chain release from the enacyloxin polyketide synthase, which assembles an antibiotic with promising activity against Acinetobacter baumannii. A non-elongating ketosynthase domain transfers the polyketide chain from the final acyl carrier protein domain of the synthase to a separate carrier protein, and a non-ribosomal peptide synthetase condensation domain condenses it with (1S,3R,4S)-3,4-dihydroxycyclohexane carboxylic acid. Molecular dissection of this process reveals that non-elongating ketosynthase domain-mediated transacylation circumvents the inability of the condensation domain to recognize the acyl carrier protein domain. Several 3,4-dihydroxycyclohexane carboxylic acid analogues can be employed for chain release, suggesting a promising strategy for producing enacyloxin analogues.

Indexed as

Acinetobacter baumanniiAcylationAnti-Bacterial AgentsMicrobial Sensitivity TestsMolecular StructurePolyenesPolyketide SynthasesAnti-Bacterial AgentsPolyenesPolyketide Synthases

Identifiers

PMID31548673
PMCPMC6774797

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.