Evidence map›Paper›PMID 31548646›Full record

ReviewNature ecology & evolution2019

A checklist for maximizing reproducibility of ecological niche models.

Xiao Feng, Daniel S Park, Cassondra Walker, A Townsend Peterson, Cory Merow, Monica Papeş

Abstract readReview
PubMed Publisher
In one paragraph

Review in Nature ecology & evolution, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Post-establishment environmental suitability ofOne health (Amsterdam, Netherlands) · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Keys to the global treeline formation: Thermal limit for its position and moisture for the taxon-specific variation.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Spatial distribution model of anoa,Biodiversity data journal · 2025
    Article
  20. Article

2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Xiao Feng *Institute of the Environment, University of Arizona, Tucson, AZ, USA. fengxiao@e-mail.arizona.edu.ORCID http://orcid.org/0000-0003-4638-3927
Daniel S Park *Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA, USA.ORCID http://orcid.org/0000-0003-2783-530X
Cassondra WalkerDepartment of Integrative Biology, Oklahoma State University, Stillwater, OK, USA.
A Townsend PetersonBiodiversity Institute, University of Kansas, Lawrence, KS, USA.
Cory MerowEcology and Evolutionary Biology, University of Connecticut, Storss, CT, USA.
Monica PapeşDepartment of Ecology and Evolutionary Biology, University of Tennessee, Knoxville, TN, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Reporting specific modelling methods and metadata is essential to the reproducibility of ecological studies, yet guidelines rarely exist regarding what information should be noted. Here, we address this issue for ecological niche modelling or species distribution modelling, a rapidly developing toolset in ecology used across many aspects of biodiversity science. Our quantitative review of the recent literature reveals a general lack of sufficient information to fully reproduce the work. Over two-thirds of the examined studies neglected to report the version or access date of the underlying data, and only half reported model parameters. To address this problem, we propose adopting a checklist to guide studies in reporting at least the minimum information necessary for ecological niche modelling reproducibility, offering a straightforward way to balance efficiency and accuracy. We encourage the ecological niche modelling community, as well as journal reviewers and editors, to utilize and further develop this framework to facilitate and improve the reproducibility of future work. The proposed checklist framework is generalizable to other areas of ecology, especially those utilizing biodiversity data, environmental data and statistical modelling, and could also be adopted by a broader array of disciplines.

Indexed as

ChecklistEcologyBiodiversityEcosystemReproducibility of Results

Identifiers

PMID31548646

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.