Evidence map›Paper›PMID 31548611›Full record

ArticleScientific reports2019

Microbiota fingerprints within the oral cavity of cetaceans as indicators for population biomonitoring.

Pedro Soares-Castro, Helena Araújo-Rodrigues, Filipa Godoy-Vitorino, Marisa Ferreira, Pablo Covelo, Alfredo López, José Vingada, Catarina Eira, Pedro Miguel Santos

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Virulence factors ofFrontiers in microbiology · 2026
    Article
  3. Journal of parasitic diseases : official organ of the Indian Society for Parasitology · 2024
    Article
  4. The Ecology of Non-Journal of fungi (Basel, Switzerland) · 2024
    Review
  5. Phylogeography and host specificity ofFrontiers in microbiology · 2023
    Article
  6. Article
  7. Specificity ofInternational journal for parasitology. Parasites and wildlife · 2022
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Pedro Soares-CastroDepartment of Biology and Centre for Molecular and Environmental Biology (CBMA), University of Minho, Campus de Gualtar, 4710-087, Braga, Portugal.ORCID http://orcid.org/0000-0003-0578-0299
Helena Araújo-RodriguesDepartment of Biology and Centre for Molecular and Environmental Biology (CBMA), University of Minho, Campus de Gualtar, 4710-087, Braga, Portugal.
Filipa Godoy-VitorinoUniversity of Puerto Rico, School of Medicine, Department of Microbiology and Medical Zoology, Microbial Ecology and Genomics Lab, GPO Box 365067, San Juan, Puerto Rico, 00936-5067, USA.
Marisa FerreiraDepartment of Biology and Centre for Molecular and Environmental Biology (CBMA), University of Minho, Campus de Gualtar, 4710-087, Braga, Portugal.
Pablo CoveloCoordinadora para o Estudo dos Mamíferos Mariños (CEMMA), P.O. Box 15, 36380, Pontevedra, Gondomar, Spain.ORCID http://orcid.org/0000-0002-4507-2943
Alfredo LópezCoordinadora para o Estudo dos Mamíferos Mariños (CEMMA), P.O. Box 15, 36380, Pontevedra, Gondomar, Spain.
José VingadaPortuguese Wildlife Society (SPVS), Quiaios, Field Station, Apartado 16 EC Quiaios, 3081-101, Figueira da Foz, Portugal.
Catarina EiraPortuguese Wildlife Society (SPVS), Quiaios, Field Station, Apartado 16 EC Quiaios, 3081-101, Figueira da Foz, Portugal.
Pedro Miguel SantosDepartment of Biology and Centre for Molecular and Environmental Biology (CBMA), University of Minho, Campus de Gualtar, 4710-087, Braga, Portugal. psantos@bio.uminho.pt.ORCID http://orcid.org/0000-0003-3234-4265
Sociedade Portuguesa de Vida Selvagem · PTUniversity of Minho · PTUniversity of Aveiro · PT

Funding

Upstream Regulation and Downstream effectors of c-MYC in Ovarian CancerU54MD007600 · NIMHD · UNIVERSITY OF PUERTO RICO MED SCIENCES · PI Abiel Roche-Lima · 2017 to 2026
$35.8M
NIMHD NIH HHS U54 MD007600
6 · The paper itself

Abstract

The composition of mammalian microbiota has been related with the host health status. In this study, we assessed the oral microbiome of 3 cetacean species most commonly found stranded in Iberian Atlantic waters (Delphinus delphis, Stenella coeruleoalba and Phocoena phocoena), using 16S rDNA-amplicon metabarcoding. All oral microbiomes were dominated by Proteobacteria, Firmicutes, Bacteroidetes and Fusobacteria bacteria, which were also predominant in the oral cavity of Tursiops truncatus. A Constrained Canonical Analysis (CCA) showed that the major factors shaping the composition of 38 oral microbiomes (p-value < 0.05) were: (i) animal species and (ii) age class, segregating adults and juveniles. The correlation analysis also grouped the microbiomes by animal stranding location and health status. Similar discriminatory patterns were detected using the data from a previous study on Tursiops truncatus, indicating that this correlation approach may facilitate data comparisons between different studies on several cetacean species. This study identified a total of 15 bacterial genera and 27 OTUs discriminating between the observed CCA groups, which can be further explored as microbiota fingerprints to develop (i) specific diagnostic assays for cetacean population conservation and (ii) bio-monitoring approaches to assess the health of marine ecosystems from the Iberian Atlantic basin, using cetaceans as bioindicators.

Indexed as

AnimalsBiological MonitoringCetaceaDNA Barcoding, TaxonomicMicrobiotaMouth

Identifiers

PMID31548611
PMCPMC6757053
OpenAlexW2973469060

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.