Evidence map›Paper›PMID 31548582›Full record

ArticleScientific reports2019

Circulation of low pathogenic avian influenza (LPAI) viruses in wild birds and poultry in the Netherlands, 2006-2016.

Saskia A Bergervoet, Sylvia B E Pritz-Verschuren, Jose L Gonzales, Alex Bossers, Marjolein J Poen, Jayeeta Dutta, Zenab Khan, Divya Kriti, Harm van Bakel, Ruth Bouwstra and 2 more

Abstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Genomic detection of highly pathogenic avian influenza H5N1 in Antarctic seabirds reveals connectivity with South American viral lineages.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Saskia A BergervoetDepartment of Virology, Wageningen Bioveterinary Research, Lelystad, The Netherlands.ORCID http://orcid.org/0000-0002-1857-2715
Sylvia B E Pritz-VerschurenDepartment of Virology, Wageningen Bioveterinary Research, Lelystad, The Netherlands.
Jose L GonzalesDepartment of Epidemiology, Wageningen Bioveterinary Research, Lelystad, The Netherlands.ORCID http://orcid.org/0000-0002-7889-5380
Alex BossersDepartment of Infection Biology, Wageningen Bioveterinary Research, Lelystad, The Netherlands.ORCID http://orcid.org/0000-0002-6586-717X
Marjolein J PoenDepartment of Viroscience, Erasmus MC, Rotterdam, The Netherlands.
Jayeeta DuttaDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, USA.
Zenab KhanDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, USA.
Divya KritiDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, USA.ORCID http://orcid.org/0000-0002-9357-5588
Harm van BakelDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, USA.ORCID http://orcid.org/0000-0002-1376-6916
Ruth BouwstraGD Animal Health Service, Deventer, The Netherlands.
Ron A M FouchierDepartment of Viroscience, Erasmus MC, Rotterdam, The Netherlands.
Nancy BeerensDepartment of Virology, Wageningen Bioveterinary Research, Lelystad, The Netherlands. nancy.beerens@wur.nl.ORCID http://orcid.org/0000-0001-6756-4431

Funding

Transforming Genomics with 5 PB Big Omics Data Engine Cray CS300-AC SupercomputerS10OD018522 · OD · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI KOVATCH, PATRICIA · 2014 to 2014
$1.9M
NIAID NIH HHS HHSN272201400008CNIH HHS S10 OD018522
6 · The paper itself

Abstract

In this study, we explore the circulation of low pathogenic avian influenza (LPAI) viruses in wild birds and poultry in the Netherlands. Surveillance data collected between 2006 and 2016 was used to evaluate subtype diversity, spatiotemporal distribution and genetic relationships between wild bird and poultry viruses. We observed close species-dependent associations among hemagglutinin and neuraminidase subtypes. Not all subtypes detected in wild birds were found in poultry, suggesting transmission to poultry is selective and likely depends on viral factors that determine host range restriction. Subtypes commonly detected in poultry were in wild birds most frequently detected in mallards and geese. Different temporal patterns in virus prevalence were observed between wild bird species. Virus detections in domestic ducks coincided with the prevalence peak in wild ducks, whereas virus detections in other poultry types were made throughout the year. Genetic analysis of the surface genes demonstrated that most poultry viruses were related to locally circulating wild bird viruses, but no direct spatiotemporal link was observed. Results indicate prolonged undetected virus circulation and frequent reassortment events with local and newly introduced viruses within the wild bird population. Increased knowledge on LPAI virus circulation can be used to improve surveillance strategies.

Indexed as

AnimalsAnimals, WildBirdsInfluenza in BirdsNetherlandsPopulation SurveillancePoultry

Identifiers

PMID31548582
PMCPMC6757041

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.