Evidence map›Paper›PMID 31548401›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2019

The structure of the colorectal cancer-associated enzyme GalNAc-T12 reveals how nonconserved residues dictate its function.

Amy J Fernandez, Earnest James Paul Daniel, Sai Pooja Mahajan, Jeffrey J Gray, Thomas A Gerken, Lawrence A Tabak, Nadine L Samara

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

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  17. Global view of human protein glycosylation pathways and functions.Nature reviews. Molecular cell biology · 2020
    Review
  18. Article
  19. Differential splicing of the lectin domain of anThe Journal of biological chemistry · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Amy J FernandezSection on Biological Chemistry, National Institute of Dental and Craniofacial Research, National Institutes of Health, Bethesda, MD 20892.
Earnest James Paul DanielDepartment of Biochemistry, Case Western Reserve University, Cleveland, OH 44106.
Sai Pooja MahajanDepartment of Chemical and Biomolecular Engineering, The Johns Hopkins University, Baltimore, MD 21218.
Jeffrey J GrayDepartment of Chemical and Biomolecular Engineering, The Johns Hopkins University, Baltimore, MD 21218.ORCID 0000-0001-6380-2324
Thomas A GerkenDepartment of Biochemistry, Case Western Reserve University, Cleveland, OH 44106.
Lawrence A TabakSection on Biological Chemistry, National Institute of Dental and Craniofacial Research, National Institutes of Health, Bethesda, MD 20892.
Nadine L SamaraStructural Biochemistry Unit, National Institute of Dental and Craniofacial Research, National Institutes of Health, Bethesda, MD, 20892 nadine.samara@nih.gov.ORCID 0000-0001-7152-2939

Funding

PROGRAM IN MOLECULAR BIOPHYSICST32GM008403 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI BARRICK, DOUGLAS E. · 1990 to 2019
$13.5M
Structure and Function of UDP-GalNAc:polypeptide alpha-GalNAc transferasesZIADE000739 · NIDCR · NATIONAL INSTITUTE OF DENTAL & CRANIOFACIAL RESEARCH · PI TABAK, LAWRENCE A. · 2012 to 2025
$12.9M
Initiation and Regulation of Mucin-Type O-GlycosylationR01GM113534 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI GERKEN, THOMAS A · 2018 to 2023
$1.6M
Technologies to predict and probe glycosyl transferR01GM127578 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI GRAY, JEFFREY J · 2018 to 2020
$1.6M
Intramural NIH HHS ZIA DE000739NIGMS NIH HHS R01 GM113534NIGMS NIH HHS R01 GM127578NIGMS NIH HHS T32 GM008403
6 · The paper itself

Abstract

Polypeptide

Indexed as

Amino Acid SequenceColorectal NeoplasmsHumansModels, MolecularN-AcetylgalactosaminyltransferasesNeoplasm ProteinsProtein ConformationGALNT12 protein, humanN-AcetylgalactosaminyltransferasesNeoplasm Proteinscolorectal cancerenzyme catalysisGalNAc-Tsmucin-type O-glycosylationsubstrate selectivity

Identifiers

PMID31548401
PMCPMC6789641

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.