Evidence map›Paper›PMID 31548394›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2019

Phosphorylation of DEPDC5, a component of the GATOR1 complex, releases inhibition of mTORC1 and promotes tumor growth.

Sathish K R Padi, Neha Singh, Jeremiah J Bearss, Virginie Olive, Jin H Song, Marina Cardó-Vila, Andrew S Kraft, Koichi Okumura

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it, 28 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Synthesis of 2-Oxoquinoline Derivatives as Dual Pim and mTORC Protein Kinase Inhibitors.Medicinal chemistry research : an international journal for rapid communications on design and mechanisms of action of biologically active agents · 2022
    Article
  10. Review
  11. Article
  12. The Roles of Post-Translational Modifications on mTOR Signaling.International journal of molecular sciences · 2021
    Review
  13. Review
  14. Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Sathish K R PadiUniversity of Arizona Cancer Center, The University of Arizona, Tucson, AZ 85724.
Neha SinghUniversity of Arizona Cancer Center, The University of Arizona, Tucson, AZ 85724.
Jeremiah J BearssDepartment of Medicine, The University of Arizona, Tucson, AZ 85724.
Virginie OliveDepartment of Medicine, The University of Arizona, Tucson, AZ 85724.
Jin H SongDepartment of Cellular and Molecular Medicine, The University of Arizona, Tucson, AZ 85724.
Marina Cardó-VilaDepartment of Otolaryngology, The University of Arizona, Tucson, AZ 85724.
Andrew S KraftUniversity of Arizona Cancer Center, The University of Arizona, Tucson, AZ 85724; akraft@uacc.arizona.edu koichiok@email.arizona.edu.
Koichi OkumuraDepartment of Physiology, The University of Arizona, Tucson, AZ 85724 akraft@uacc.arizona.edu koichiok@email.arizona.edu.
University of Arizona · US

Funding

VITAMIN AP30CA023074 · NCI · UNIVERSITY OF ARIZONA · PI Teri L Bankhead · 1985 to 2026
$110.2M
Targeting the Pim 1 Protein Kinase to Overcome Resistance to AKT InhibitorsR01CA173200 · NCI · UNIVERSITY OF ARIZONA · PI KRAFT, ANDREW S · 2013 to 2017
$1.6M
NCI NIH HHS P30 CA023074NCI NIH HHS R01 CA173200
6 · The paper itself

Abstract

The Pim and AKT serine/threonine protein kinases are implicated as drivers of cancer. Their regulation of tumor growth is closely tied to the ability of these enzymes to mainly stimulate protein synthesis by activating mTORC1 (mammalian target of rapamycin complex 1) signaling, although the exact mechanism is not completely understood. mTORC1 activity is normally suppressed by amino acid starvation through a cascade of multiple regulatory protein complexes, e.g., GATOR1, GATOR2, and KICSTOR, that reduce the activity of Rag GTPases. Bioinformatic analysis revealed that DEPDC5 (DEP domain containing protein 5), a component of GATOR1 complex, contains Pim and AKT protein kinase phosphorylation consensus sequences. DEPDC5 phosphorylation by Pim and AKT kinases was confirmed in cancer cells through the use of phospho-specific antibodies and transfection of phospho-inactive DEPDC5 mutants. Consistent with these findings, during amino acid starvation the elevated expression of Pim1 overcame the amino acid inhibitory protein cascade and activated mTORC1. In contrast, the knockout of DEPDC5 partially blocked the ability of small molecule inhibitors against Pim and AKT kinases both singly and in combination to suppress tumor growth and mTORC1 activity in vitro and in vivo. In animal experiments knocking in a glutamic acid (S1530E) in DEPDC5, a phospho mimic, in tumor cells induced a significant level of resistance to Pim and the combination of Pim and AKT inhibitors. Our results indicate a phosphorylation-dependent regulatory mechanism targeting DEPDC5 through which Pim1 and AKT act as upstream effectors of mTORC1 to facilitate proliferation and survival of cancer cells.

Indexed as

Cell ProliferationMutationAnimalsApoptosisGTPase-Activating ProteinsHumansMaleMechanistic Target of Rapamycin Complex 1MiceMice, Inbred NODMice, SCIDNeoplasmsPhosphorylationProto-Oncogene Proteins c-aktProto-Oncogene Proteins c-pim-1Signal TransductionAKT1 protein, humanDEPDC5 protein, humanGTPase-Activating ProteinsMechanistic Target of Rapamycin Complex 1PIM1 protein, humanProto-Oncogene Proteins c-aktProto-Oncogene Proteins c-pim-1AKT kinaseDEPDC5GATOR1mTORC1Pim kinase

Identifiers

PMID31548394
PMCPMC6789643
OpenAlexW2975408302

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.