Evidence map›Paper›PMID 31548387›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2019

A marine plasmid hitchhiking vast phylogenetic and geographic distances.

Jörn Petersen, John Vollmers, Victoria Ringel, Henner Brinkmann, Claire Ellebrandt-Sperling, Cathrin Spröer, Alexandra M Howat, J Colin Murrell, Anne-Kristin Kaster

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

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  4. Fluid flow generates bacterial conjugation hot spots by increasing the rate of shear-driven cell-cell encounters.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  16. Quantifying the transmission of antimicrobial resistance at the human and livestock interface with genomics.Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Jörn PetersenDepartment of Microbial Ecology and Evolution, Leibniz-Institut DSMZ (Deutsche Sammlung von Mikroorganismen und Zellkulturen) GmbH, D-38124 Braunschweig, Germany; joern.petersen@dsmz.de john.vollmers@kit.edu kaster@kit.edu.
John VollmersInstitute for Biological Interfaces 5, Karlsruhe Institute of Technology, D-76344 Eggenstein-Leopoldshafen, Germany; joern.petersen@dsmz.de john.vollmers@kit.edu kaster@kit.edu.
Victoria RingelDepartment of Microbial Ecology and Evolution, Leibniz-Institut DSMZ (Deutsche Sammlung von Mikroorganismen und Zellkulturen) GmbH, D-38124 Braunschweig, Germany.
Henner BrinkmannDepartment of Microbial Ecology and Evolution, Leibniz-Institut DSMZ (Deutsche Sammlung von Mikroorganismen und Zellkulturen) GmbH, D-38124 Braunschweig, Germany.
Claire Ellebrandt-SperlingDepartment of Microbial Ecology and Evolution, Leibniz-Institut DSMZ (Deutsche Sammlung von Mikroorganismen und Zellkulturen) GmbH, D-38124 Braunschweig, Germany.
Cathrin SpröerDepartment of Microbial Ecology and Evolution, Leibniz-Institut DSMZ (Deutsche Sammlung von Mikroorganismen und Zellkulturen) GmbH, D-38124 Braunschweig, Germany.
Alexandra M HowatSchool of Environmental Sciences, University of East Anglia, NR4 7TJ Norwich, United Kingdom.
J Colin MurrellSchool of Environmental Sciences, University of East Anglia, NR4 7TJ Norwich, United Kingdom.
Anne-Kristin KasterInstitute for Biological Interfaces 5, Karlsruhe Institute of Technology, D-76344 Eggenstein-Leopoldshafen, Germany; joern.petersen@dsmz.de john.vollmers@kit.edu kaster@kit.edu.ORCID 0000-0002-6361-9551

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Horizontal gene transfer (HGT) plays an important role in bacterial evolution and serves as a driving force for bacterial diversity and versatility. HGT events often involve mobile genetic elements like plasmids, which can promote their own dissemination by associating with adaptive traits in the gene pool of the so-called mobilome. Novel traits that evolve through HGT can therefore lead to the exploitation of new ecological niches, prompting an adaptive radiation of bacterial species. In this study, we present phylogenetic, biogeographic, and functional analyses of a previously unrecognized RepL-type plasmid found in diverse members of the marine Roseobacter group across the globe. Noteworthy, 100% identical plasmids were detected in phylogenetically and geographically distant bacteria, revealing a so-far overlooked, but environmentally highly relevant vector for HGT. The genomic and functional characterization of this plasmid showed a completely conserved backbone dedicated to replication, stability, and mobilization as well as an interchangeable gene cassette with highly diverse, but recurring motifs. The majority of the latter appear to be involved in mechanisms coping with toxins and/or pollutants in the marine environment. Furthermore, we provide experimental evidence that the plasmid has the potential to be transmitted across bacterial orders, thereby increasing our understanding of evolution and microbial niche adaptation in the environment.

Indexed as

EnvironmentGene Transfer, HorizontalBacterial ProteinsEvolution, MolecularGenome, BacterialGeographyPhylogenyPlasmidsRecombination, GeneticRoseobacterBacterial Proteinschromate resistancehorizontal gene transferRepL-type plasmidRoseobacter group

Identifiers

PMID31548387
PMCPMC6789725

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.