Evidence map›Paper›PMID 31548365›Full record

ArticleJournal of lipid research2019

Lipid species affect morphology of endoplasmic reticulum: a sea urchin oocyte model of reversible manipulation.

Gabriela Ulloa, Fadi Hamati, Alexander Dick, Julie Fitzgerald, Judith Mantell, Paul Verkade, Lucy Collinson, Kenton Arkill, Banafshe Larijani, Dominic Poccia

Open access · hybridAbstract read
In one paragraph

Article in Journal of lipid research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. The Inner Nuclear Membrane Has a Unique Lipid Signature.BioEssays : news and reviews in molecular, cellular and developmental biology · 2025
    Review
  4. Review
  5. Article
  6. Review
  7. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 3 countries.

Gabriela UlloaDepartment of Biology, Amherst College, Amherst, MA.
Fadi HamatiDepartment of Biology, Amherst College, Amherst, MA.
Alexander DickDepartment of Biology, Amherst College, Amherst, MA.
Julie FitzgeraldDepartment of Biology, Amherst College, Amherst, MA.
Judith MantellSchool of Biochemistry, University of Bristol, Bristol, United Kingdom.
Paul VerkadeSchool of Biochemistry, University of Bristol, Bristol, United Kingdom.
Lucy CollinsonFrancis Crick Institute, London, United Kingdom.
Kenton ArkillSchool of Medicine, Faculty of Medicine and Health Sciences, University of Nottingham Medical School, Nottingham, United Kingdom.
Banafshe LarijaniCentre for Therapeutic Innovation, Cell Biophysics Laboratory, Department of Pharmacy and Pharmacology and Department of Physics, University of Bath, Claverton Down, Bath, United Kingdom, and Cell Biophysics Laboratory, Ikerbasque, Basque Foundation for Science, Research Centre for Experimental Marine Biology and Biotechnology (PiE) and Biophysics Institute (UPV/EHU, CSIC), University of the Basque Country, Leioa, Spain.ORCID 0000-0003-4735-1169
Dominic PocciaDepartment of Biology, Amherst College, Amherst, MA dlpoccia@amherst.edu.
Amherst College · USUniversity of Bristol · GBIkerbasque · ESThe Francis Crick Institute · GBUniversity of Nottingham · GB

Funding

Biotechnology and Biological Sciences Research CouncilBritish Heart Foundation PG/15/37/31438Cancer Research UK FC001999Medical Research Council FC001999Medical Research Council MR/K01580X/1Medical Research Council MR/P003214/1Wellcome Trust
6 · The paper itself

Abstract

The ER is a large multifunctional organelle of eukaryotic cells. Malfunction of the ER in various disease states, such as atherosclerosis, diabetes, cancer, Alzheimer's and Parkinson's and amyotrophic lateral sclerosis, often correlates with alterations in its morphology. The ER exhibits regionally variable membrane morphology that includes, at the extremes, large relatively flat surfaces and interconnected tubular structures highly curved in cross-section. ER morphology is controlled by shaping proteins that associate with membrane lipids. To investigate the role of these lipids, we developed a sea urchin oocyte model, a relatively quiescent cell in which the ER consists mostly of tubules. We altered levels of endogenous diacylglycerol (DAG), phosphatidylethanolamine (PtdEth), and phosphatidylcholine by microinjection of enzymes or lipid delivery by liposomes and evaluated shape changes with 2D and 3D confocal imaging and 3D electron microscopy. Decreases and increases in the levels of lipids such as DAG or PtdEth characterized by negative spontaneous curvature correlated with conversion to sheet structures or tubules, respectively. The effects of endogenous alterations of DAG were reversible upon exogenous delivery of lipids of negative spontaneous curvature. These data suggest that proteins require threshold amounts of such lipids and that localized deficiencies of the lipids could contribute to alterations of ER morphology. The oocyte modeling system should be beneficial to studies directed at understanding requirements of lipid species in interactions leading to alterations of organelle shaping.

Indexed as

Sea UrchinsAnimalsEndoplasmic ReticulumOocytesPhospholipidsProtein BiosynthesisPhospholipidsconfocal microscopydiacylglycerolelectron tomographylipid kinasesmembrane lipidsnegative spontaneous curvaturephospholipasesserial blockface scanning electron microscopy

Identifiers

PMID31548365
PMCPMC6824487
OpenAlexW2975135083

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.