Evidence map›Paper›PMID 31548257›Full record

ArticleThe Plant cell2019

AvrRpm1 Functions as an ADP-Ribosyl Transferase to Modify NOI-domain Containing Proteins, Including Arabidopsis and Soybean RPM1-interacting Protein 4.

Thomas J Redditt, Eui-Hwan Chung, Hana Zand Karimi, Natalie Rodibaugh, Yixiang Zhang, Jonathan C Trinidad, Jin Hee Kim, Qian Zhou, Mingzhe Shen, Jeffery L Dangl and 2 more

Abstract read
In one paragraph

Article in The Plant cell, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Redundant and Diversified Roles Among SelectedFrontiers in plant science · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Thomas J ReddittIndiana University CITY: Bloomington STATE: IN United States Of America [US].
Eui-Hwan ChungUniversity of North Carolina CITY: Chappel Hill STATE: NC United States Of America [US].
Hana Zand KarimiIndiana University CITY: Bloomington STATE: Indiana United States Of America [US].
Natalie RodibaughIndiana University CITY: Bloomington STATE: IN United States Of America [US].
Yixiang ZhangIndiana University CITY: Bloomington STATE: IN United States Of America [US].
Jonathan C TrinidadIndiana University CITY: Bloomington STATE: IN United States Of America [US].
Jin Hee KimCenter for Plant Aging Research, Institute for Basic Science (IBS) CITY: Daegu Korea (South), Republic Of.
Qian ZhouOhio State University CITY: Columbus STATE: OH United States Of America [US].
Mingzhe ShenGyeongsang National University CITY: Jinju Korea (South), Republic Of.
Jeffery L DanglUniversity of North Carolina CITY: Chapel Hill STATE: North Carolina POSTAL_CODE: 27599-3280 United States Of America [US].
David M MackeyOhio State University CITY: Columbus STATE: Ohio POSTAL_CODE: 43210 United States Of America [US].
Roger W InnesIndiana University CITY: Bloomington STATE: Indiana POSTAL_CODE: 47405-7107 United States Of America [US] rinnes@indiana.edu.

Funding

Elucidating RIN4_Mediated Immune Signaling Cascades in ArabidopsisR01GM092772 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI COAKER, GITTA LAUREL · 2010 to 2018
$2.8M
NIGMS NIH HHS R01 GM092772
6 · The paper itself

Abstract

The Pseudomonas syringae effector protein AvrRpm1 activates the Arabidopsis intracellular innate immune receptor protein RPM1 via modification of a second Arabidopsis protein, RIN4. Prior work has shown that AvrRpm1 induces phosphorylation of AtRIN4, but homology modeling indicated that AvrRpm1 may be an ADP-ribosyl transferase. Here we show that AvrRpm1 induces ADP-ribosylation of RIN4 proteins from both Arabidopsis and soybean within two highly conserved nitrate-induced (NOI) domains. It also ADP-ribosylates at least ten additional Arabidopsis NOI domain-containing proteins. The ADP-ribosylation activity of AvrRpm1 is required for subsequent phosphorylation on threonine 166 of Arabidopsis RIN4, an event that is necessary and sufficient for RPM1 activation. We also show that the C-terminal NOI domain of AtRIN4 interacts with the exocyst subunits EXO70B1, EXO70E1, EXO70E2 and EXO70F1. Mutation of either EXO70B1 or EXO70E2 inhibited secretion of callose induced by the bacterial flagellin-derived peptide flg22. Substitution of RIN4 threonine 166 with aspartate enhanced the association of AtRIN4 with EXO70E2, which we posit inhibits its callose deposition function. Collectively, these data indicate that AvrRpm1 ADP-ribosyl transferase activity contributes to virulence by promoting phosphorylation of RIN4 threonine 166, which inhibits the secretion of defense compounds by promoting the inhibitory association of RIN4 with EXO70 proteins.

Identifiers

PMID31548257
PMCPMC6881136

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.