Evidence map›Paper›PMID 31544062›Full record

ArticleFrontiers in oncology2019

An Open-Source Tool for Anisotropic Radiation Therapy Planning in Neuro-oncology Using DW-MRI Tractography.

Kesshi Jordan, Olivier Morin, Michael Wahl, Bagrat Amirbekian, Christopher Chapman, Julia Owen, Pratik Mukherjee, Steve Braunstein, Roland Henry

Abstract read
In one paragraph

Article in Frontiers in oncology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Kesshi JordanDepartment of Neurology, University of California, San Francisco, San Francisco, CA, United States.
Olivier MorinDepartment of Radiation Oncology, University of California, San Francisco, San Francisco, CA, United States.
Michael WahlDepartment of Radiation Oncology, University of California, San Francisco, San Francisco, CA, United States.
Bagrat AmirbekianDepartment of Neurology, University of California, San Francisco, San Francisco, CA, United States.
Christopher ChapmanDepartment of Radiation Oncology, University of California, San Francisco, San Francisco, CA, United States.
Julia OwenJoint Graduate Group in Bioengineering, University of California San Francisco and University of California Berkeley, San Francisco/Berkeley, CA, United States.
Pratik MukherjeeJoint Graduate Group in Bioengineering, University of California San Francisco and University of California Berkeley, San Francisco/Berkeley, CA, United States.
Steve BraunsteinDepartment of Radiation Oncology, University of California, San Francisco, San Francisco, CA, United States.
Roland HenryDepartment of Neurology, University of California, San Francisco, San Francisco, CA, United States.

Funding

Multimodal Connectivity for Surgical MappingR01NS066654 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HENRY, ROLAND GILBERT · 2009 to 2013
$1.3M
NINDS NIH HHS R01 NS066654
6 · The paper itself

Abstract

There is evidence from histopathological studies that glioma tumor cells migrate preferentially along large white matter bundles. If the peritumoral white matter structures can be used to predict the likely trajectory of migrating tumor cells outside of the surgical margin, then this information could be used to inform the delineation of radiation therapy (RT) targets. In theory, an anisotropic expansion that takes large white matter bundle anatomy into account may maximize the chances of treating migrating cancer cells and minimize the amount of brain tissue exposed to high doses of ionizing radiation. Diffusion-weighted MRI (DW-MRI) can be used in combination with fiber tracking algorithms to model the trajectory of large white matter pathways using the direction and magnitude of water movement in tissue. The method presented here is a tool for translating a DW-MRI fiber tracking (tractography) dataset into a white matter path length (WMPL) map that assigns each voxel the shortest distance along a streamline back to a specified region of interest (ROI). We present an open-source WMPL tool, implemented in the package Diffusion Imaging in Python (DIPY), and code to convert the resulting WMPL map to anisotropic contours for RT in a commercial treatment planning system. This proof-of-concept lays the groundwork for future studies to evaluate the clinical value of incorporating tractography modeling into treatment planning.

Indexed as

code:Pythondiffusion MRI (dMRI)gliomaneuro oncologyradiation therapy (radiotherapy)tractography

Identifiers

PMID31544062
PMCPMC6730482

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.