Evidence map›Paper›PMID 31543897›Full record

ArticleFrontiers in genetics2019

Compositional Analysis of Flatworm Genomes Shows Strong Codon Usage Biases Across All Classes.

Guillermo Lamolle, Santiago Fontenla, Gastón Rijo, Jose F Tort, Pablo Smircich

Abstract read
In one paragraph

Article in Frontiers in genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Guillermo LamolleDepartamento de Genética, Facultad de Medicina, Universidad de la Republica, UDELAR, Montevideo, Uruguay.
Santiago FontenlaDepartamento de Genética, Facultad de Medicina, Universidad de la Republica, UDELAR, Montevideo, Uruguay.
Gastón RijoDepartamento de Genética, Facultad de Medicina, Universidad de la Republica, UDELAR, Montevideo, Uruguay.
Jose F TortDepartamento de Genética, Facultad de Medicina, Universidad de la Republica, UDELAR, Montevideo, Uruguay.
Pablo SmircichDepartamento de Genómica, Instituto de Investigaciones Biológicas Clemente Estable, IIBCE, MEC, Montevideo, Uruguay.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the present work, we performed a comparative genome-wide analysis of 22 species representative of the main clades and lifestyles of the phylum Platyhelminthes. We selected a set of 700 orthologous genes conserved in all species, measuring changes in GC content, codon, and amino acid usage in orthologous positions. Values of 3

Indexed as

amino acid usagecodon usageflatwormsGC contentmutationnon-synonymous substitutionsselectionsynonymous codons

Identifiers

PMID31543897
PMCPMC6739440

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.