Evidence map›Paper›PMID 31542563›Full record

ArticleProtein expression and purification2020

Bax expression is optimal at low oxygen tension and constant agitation.

Yi He, Yong Chen, Daniel L Morris, Duck-Yeon Lee, Nico Tjandra

Open access · hybridAbstract read
In one paragraph

Article in Protein expression and purification, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Yi HeNational Institutes of Health, National Heart, Lung and Blood Institute, Biochemistry and Biophysics Center, Bethesda, MD, 20892, USA. Electronic address: hey4@nhlbi.nih.gov.
Yong ChenNational Institutes of Health, National Heart, Lung and Blood Institute, Proteomics Core, Bethesda, MD, 20892, USA.
Daniel L MorrisNational Institutes of Health, National Heart, Lung and Blood Institute, Biochemistry and Biophysics Center, Bethesda, MD, 20892, USA.
Duck-Yeon LeeNational Institutes of Health, National Heart, Lung and Blood Institute, Biochemistry Core, Bethesda, MD, 20892, USA.
Nico TjandraNational Institutes of Health, National Heart, Lung and Blood Institute, Biochemistry and Biophysics Center, Bethesda, MD, 20892, USA.
National Heart Lung and Blood Institute · USNational Institutes of Health · US

Funding

Regulation of mitochondria morphologyZIAHL006064 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI TJANDRA, NICO · 2010 to 2025
$20.9M
Biochemistry CoreZICHL006227 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI LEE, DUCK-YEON · 2017 to 2025
$4.6M
Intramural NIH HHS Z99 HL999999
6 · The paper itself

Abstract

Bax is a pro-apoptosis protein that translocates from the cytosol to the mitochondria membrane upon initiation of programed cell death. Bax subsequently disrupts the mitochondria membrane, resulting in the release of cytochrome C which activates the downstream caspases. The structure of inactive Bax has been solved, but despite intensive investigation, the mechanism by which it regulates apoptosis is not established. The low yield of Bax expression in E. coli hampers efforts to elucidate the mechanism. Thus, we undertook a systematic study aimed at improving the yield of Bax. Bacteria were grown in a computer-controlled fermenter and expression was induced by addition of Isopropyl ß-d-1-thiogalactopyranoside (IPTG). The Bax expression level decreased continuously when the dissolved oxygen level was kept at 30%, which is non-limiting for E. coli. Alternatively, when oxygen input was decreased with constant agitation and air flow (or k

Indexed as

bcl-2-Associated X ProteinBioreactorsChromatography, AffinityChromatography, High Pressure LiquidEscherichia coliFatty Acids, VolatileFermentationGene ExpressionGlycerolHydrogen-Ion ConcentrationOxygenProteomicsTransfectionBAX protein, humanbcl-2-Associated X ProteinFatty Acids, VolatileGlycerolOxygenDissolved oxygen in fermentationk(L)a in fermenterProteomic analysisRecombinant protein expression

Identifiers

PMID31542563
PMCPMC6908824
OpenAlexW2973574426

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.