Evidence map›Paper›PMID 31541912›Full record

ArticleJournal of neuroscience methods2019

Does data cleaning improve brain state classification?

Steven L Meisler, Michael J Kahana, Youssef Ezzyat

Abstract read
In one paragraph

Article in Journal of neuroscience methods, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. The Penn Electrophysiology of Encoding and Retrieval Study.Journal of experimental psychology. Learning, memory, and cognition · 2024
    Article
  4. A Learned Map for Places and Concepts in the Human Medial Temporal Lobe.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2023
    Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Steven L MeislerDept. of Psychology, University of Pennsylvania, Philadelphia, PA 19104, USA.
Michael J KahanaDept. of Psychology, University of Pennsylvania, Philadelphia, PA 19104, USA.
Youssef EzzyatDept. of Psychology, University of Pennsylvania, Philadelphia, PA 19104, USA. Electronic address: yezzyat1@swarthmore.edu.

Funding

Associative Processes in Episodic MemoryR01MH055687 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI KAHANA, MICHAEL JACOB · 2002 to 2024
$7.9M
Training Program in Neuroengineering and MedicineT32NS091006 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI Brian Litt · 2015 to 2026
$4.1M
MATHEMATICAL MODELS OF HUMAN MEMORYR29MH055687 · NIMH · BRANDEIS UNIVERSITY · PI KAHANA, MICHAEL JACOB · 1997 to 2001
$218k
NIMH NIH HHS R01 MH055687NIMH NIH HHS R29 MH055687NINDS NIH HHS T32 NS091006
6 · The paper itself

Abstract

backgroundNeuroscientists routinely seek to identify and remove noisy or artifactual observations from their data. They do so with the belief that removing such data improves power to detect relations between neural activity and behavior, which are often subtle and can be overwhelmed by noise. Whereas standard methods can exclude certain well-defined noise sources (e.g., 50/60 Hz electrical noise), in many situations there is not a clear difference between noise and signals so it is not obvious how to separate the two. Here we ask whether methods routinely used to "clean" human electrophysiological recordings lead to greater power to detect brain-behavior relations. NEW

methodThis, to the authors' knowledge, is the first large-scale simultaneous evaluation of multiple commonly used methods for removing noise from intracranial EEG recordings.

resultsWe find that several commonly used data cleaning methods (automated methods based on statistical signal properties and manual methods based on expert review) do not increase the power to detect univariate and multivariate electrophysiological biomarkers of successful episodic memory encoding, a well-characterized broadband pattern of neural activity observed across the brain. COMPARISON WITH EXISTING

methodsResearchers may be more likely to increase statistical power to detect physiological phenomena of interest by allocating resources away from cleaning noisy data and toward collecting more within-patient observations.

conclusionsThese findings highlight the challenge of partitioning signal and noise in the analysis of brain-behavior relations, and suggest increasing sample size and numbers of observations, rather than data cleaning, as the best approach to improving statistical power.

Indexed as

Memory, EpisodicSignal Processing, Computer-AssistedAdultBrainElectrocorticographyEpilepsyHumansMental RecallNeurosciencesEpisodic memoryIntracranial EEGMultivariateNoise removalPhysiology

Identifiers

PMID31541912
PMCPMC11225530

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.