Evidence map›Paper›PMID 31541269›Full record

ReviewDer Urologe. Ausg. A2020

[Status of the availability and use of next generation sequencing (NGS) in bladder cancer-a questionnaire within the uropathology working group].

N Ortiz-Brüchle, M Muders, M Toma, I Esposito, A Hartmann, R Stöhr, H Reis, P Wild, J Köllermann, F Bremmer and 14 more

Abstract readReview
PubMed Publisher
In one paragraph

Review in Der Urologe. Ausg. A, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors.

N Ortiz-BrüchleInstitut für Pathologie, Uniklinikum, RWTH Aachen, Pauelsstraße 30, 52074, Aachen, Deutschland.
M MudersInstitut für Pathologie, Universitätsklinikum Bonn, Bonn, Deutschland.
M TomaInstitut für Pathologie, Universitätsklinikum Bonn, Bonn, Deutschland.
I EspositoInstitut für Pathologie, Universitätsklinikum Düsseldorf, Heinrich-Heine Universität, Düsseldorf, Deutschland.
A HartmannInstitut für Pathologie, Universitätsklinikum Erlangen, Erlangen, Deutschland.
R StöhrInstitut für Pathologie, Universitätsklinikum Erlangen, Erlangen, Deutschland.
H ReisInstitut für Pathologie, Universitätsklinikum Essen, Essen, Deutschland.
P WildDr. Senckenbergisches Institut für Pathologie, Frankfurt, Deutschland.
J KöllermannDr. Senckenbergisches Institut für Pathologie, Frankfurt, Deutschland.
F BremmerInstitut für Pathologie, Universitätsklinikum Göttingen, Göttingen, Deutschland.
J LeichsenringMolekularpathologisches Zentrum, Pathologisches Institut, Universitätsklinikum Heidelberg, Heidelberg, Deutschland.
A StenzingerMolekularpathologisches Zentrum, Pathologisches Institut, Universitätsklinikum Heidelberg, Heidelberg, Deutschland.
S Merkelbach-BruseInstitut für Pathologie, Uniklinik Köln, Köln, Deutschland.
S KirfelInstitut für Pathologie, Universitätsklinikum Lübeck, Lübeck, Deutschland.
S PernerInstitut für Pathologie, Universitätsklinikum Lübeck, Lübeck, Deutschland.
N HartmannInstitut für Pathologie, Universitätsklinikum Mainz, Mainz, Deutschland.
W RothInstitut für Pathologie, Universitätsklinikum Mainz, Mainz, Deutschland.
A JungPathologisches Institut, LMU München, München, Deutschland.
T KirchnerPathologisches Institut, LMU München, München, Deutschland.
K SchwambornInstitut für Pathologie, TU München, München, Deutschland.
N PfarrInstitut für Pathologie, TU München, München, Deutschland.
E DahlInstitut für Pathologie, Uniklinikum, RWTH Aachen, Pauelsstraße 30, 52074, Aachen, Deutschland.
R KnüchelInstitut für Pathologie, Uniklinikum, RWTH Aachen, Pauelsstraße 30, 52074, Aachen, Deutschland.
N T GaisaInstitut für Pathologie, Uniklinikum, RWTH Aachen, Pauelsstraße 30, 52074, Aachen, Deutschland. ngaisa@ukaachen.de.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundTechnical advancement and availability of high-throughput analysis has advanced molecular subtyping of most cancers. Thus, new possibilities for precision oncology have emerged.

aimTherefore, we aimed to collect data regarding availability and use of next generation sequencing (NGS) for urothelial cancer within the uropathology working group of the German Society of Pathology.

methodsWe collected data by questionnaires and additionally asked for sequencing results of bladder cancers in the participating institutions.

resultsA total of 13 university-affiliated institutes of pathology took part in the survey. All university institutes offer NGS-based molecular panel diagnostics and provide panels covering between 15 and 170 genes. Altogether, only 20 bladder cancers were sequenced in routine diagnostics and for 10 cancers potential targeted treatment options were available. DISCUSSION: So far, despite availability of NGS diagnostics at university institutes of pathology, only few bladder cancer samples have been sequenced. Based on current data from the molecular subtyping of bladder cancers, we recommend a step-by-step protocol with basic immunohistochemistry analysis and subsequent subtype-dependent analyses, e.g., alterations of the fibroblast growth factor receptors (FGFR) or comprehensive gene panel analyses.

Indexed as

High-Throughput Nucleotide SequencingPrecision MedicineHumansMutationPathology, MolecularSurveys and QuestionnairesUrinary Bladder NeoplasmsBladder cancerMolecular pathologyNext generation sequencingPrecision oncologyTargeted treatment

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.