Evidence map›Paper›PMID 31541153›Full record

ArticleNature communications2019

ImmGen report: sexual dimorphism in the immune system transcriptome.

Shani Talia Gal-Oz, Barbara Maier, Hideyuki Yoshida, Kumba Seddu, Nitzan Elbaz, Charles Czysz, Or Zuk, Barbara E Stranger, Hadas Ner-Gaon, Tal Shay

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 176 papers, 6 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
176citing papers in PubMed, 6 pooled it
11.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

176 citing papers in PubMed, 6 syntheses or guidelines pooled it, 298 citations in OpenAlex.

  1. Pooled it
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  16. Sexual Dimorphism in Allergic and Mast Cell-Associated Diseases.Clinical reviews in allergy & immunology · 2026
    Review
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116 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 3 countries.

Shani Talia Gal-OzDepartment of Life Sciences, Ben-Gurion University of the Negev, Beer-Sheva, Israel.ORCID http://orcid.org/0000-0001-7775-2006
Barbara MaierThe Precision Immunology Institute & Department of Oncological Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Hideyuki YoshidaDepartment of Immunology, Harvard Medical School, Boston, MA, USA.
Kumba SedduDepartment of Immunology, Harvard Medical School, Boston, MA, USA.
Nitzan ElbazDepartment of Life Sciences, Ben-Gurion University of the Negev, Beer-Sheva, Israel.
Charles CzyszSection of Genetic Medicine, Institute for Genomics and Systems Biology, University of Chicago, Chicago, IL, USA.
Or ZukDepartment of Statistics, The Hebrew University of Jerusalem, Jerusalem, Israel.
Barbara E StrangerSection of Genetic Medicine, Institute for Genomics and Systems Biology, University of Chicago, Chicago, IL, USA.ORCID http://orcid.org/0000-0001-9021-7331
Hadas Ner-GaonDepartment of Life Sciences, Ben-Gurion University of the Negev, Beer-Sheva, Israel.ORCID http://orcid.org/0000-0002-6288-5065
Tal ShayDepartment of Life Sciences, Ben-Gurion University of the Negev, Beer-Sheva, Israel. talshay@bgu.ac.il.ORCID http://orcid.org/0000-0003-0755-1350
Ben-Gurion University of the Negev · ILHarvard University · USHebrew University of Jerusalem · ILIcahn School of Medicine at Mount Sinai · USNorthwestern University · USUniversity of Chicago · US

Funding

ImmGen: Gene Expression and Regulation in Immune CellsR24AI072073 · NIAID · JOSLIN DIABETES CENTER · PI CHRISTOPHE O. BENOIST · 2007 to 2026
$28.5M
NIAID NIH HHS R24 AI072073
6 · The paper itself

Abstract

Sexual dimorphism in the mammalian immune system is manifested as more frequent and severe infectious diseases in males and, on the other hand, higher rates of autoimmune disease in females, yet insights underlying those differences are still lacking. Here we characterize sex differences in the immune system by RNA and ATAC sequence profiling of untreated and interferon-induced immune cell types in male and female mice. We detect very few differentially expressed genes between male and female immune cells except in macrophages from three different tissues. Accordingly, very few genomic regions display differences in accessibility between sexes. Transcriptional sexual dimorphism in macrophages is mediated by genes of innate immune pathways, and increases after interferon stimulation. Thus, the stronger immune response of females may be due to more activated innate immune pathways prior to pathogen invasion.

Indexed as

Immune SystemSex CharacteristicsTranscriptomeAnimalsComputational BiologyEpigenomicsFemaleGene Expression ProfilingGene Expression RegulationGenomicsHumansImmunity, InnateInterferonsMacrophagesMaleMiceInterferonsRNA

Identifiers

PMID31541153
PMCPMC6754408
OpenAlexW2973429485

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.