Evidence map›Paper›PMID 31541138›Full record

ArticleScientific reports2019

Analysis of mutations leading to para-aminosalicylic acid resistance in Mycobacterium tuberculosis.

Bharati Pandey, Sonam Grover, Jagdeep Kaur, Abhinav Grover

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 22 citations in OpenAlex.

  1. Computational Mutagenesis and Inhibition ofBioMed research international · 2024
    Article
  2. Review
  3. Review
  4. Ionic liquid/TiORSC advances · 2022
    Article
  5. Article
  6. Review
  7. Article
  8. Combining structure and genomics to understand antimicrobial resistance.Computational and structural biotechnology journal · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Bharati PandeyDepartment of Biotechnology, Panjab University, 160014, Chandigarh, India.
Sonam GroverJH-Institute of Molecular Medicine, Jamia Hamdard, Hamdard Nagar, 110062, New Delhi, India.
Jagdeep KaurDepartment of Biotechnology, Panjab University, 160014, Chandigarh, India.
Abhinav GroverSchool of Biotechnology, Jawaharlal Nehru University, 110067, New Delhi, India. abhinavgr@gmail.com.
Panjab University · INJamia Hamdard · INJawaharlal Nehru University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Thymidylate synthase A (ThyA) is the key enzyme involved in the folate pathway in Mycobacterium tuberculosis. Mutation of key residues of ThyA enzyme which are involved in interaction with substrate 2'-deoxyuridine-5'-monophosphate (dUMP), cofactor 5,10-methylenetetrahydrofolate (MTHF), and catalytic site have caused para-aminosalicylic acid (PAS) resistance in TB patients. Focusing on R127L, L143P, C146R, L172P, A182P, and V261G mutations, including wild-type, we performed long molecular dynamics (MD) simulations in explicit solvent to investigate the molecular principles underlying PAS resistance due to missense mutations. We found that these mutations lead to (i) extensive changes in the dUMP and MTHF binding sites, (ii) weak interaction of ThyA enzyme with dUMP and MTHF by inducing conformational changes in the structure, (iii) loss of the hydrogen bond and other atomic interactions and (iv) enhanced movement of protein atoms indicated by principal component analysis (PCA). In this study, MD simulations framework has provided considerable insight into mutation induced conformational changes in the ThyA enzyme of Mycobacterium.

Indexed as

Aminosalicylic AcidBinding SitesBiochemical PhenomenaDiagnostic Tests, RoutineDrug Resistance, BacterialHumansMolecular Dynamics SimulationMutationMutation, MissenseMycobacterium tuberculosisThymidylate SynthaseAminosalicylic AcidThymidylate Synthase

Identifiers

PMID31541138
PMCPMC6754364
OpenAlexW2973726114

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.