ArticleNature communications2019
Local-to-global signal transduction at the core of a Mn
Abstract read
In one paragraph
Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.
0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
22 citing papers in PubMed.
- pH-dependent allosteric remodeling of a bacterial riboswitch couples alkaline activation to metal sensing.Nucleic acids research · 2026Article
- Alternative probe chemistries for single-molecule analysis of long noncoding RNA.The Journal of biological chemistry · 2026Article
- Alternative probe chemistries for single-molecule analysis of long non-coding RNA.bioRxiv : the preprint server for biology · 2026Article
- Foundation model for efficient biological discovery in single-molecule time traces.Nature methods · 2025Article
- Observation of SAM-VI Riboswitch Dynamics Using Single-Molecule FRET.Biomolecules · 2025Article
- Structurally distinct manganese-sensing riboswitch aptamers regulate different expression platform architectures.Nucleic acids research · 2025Article
- Article
- Bacterial Metallostasis: Metal Sensing, Metalloproteome Remodeling, and Metal Trafficking.Chemical reviews · 2024Review
- FRET-guided modeling of nucleic acids.Nucleic acids research · 2024Article
- A nascent riboswitch helix orchestrates robust transcriptional regulation through signal integration.Nature communications · 2024Article
- Direct observation of tRNA-chaperoned folding of a dynamic mRNA ensemble.Nature communications · 2023Article
- Discovering riboswitches: the past and the future.Trends in biochemical sciences · 2023Review
- Probing Transient Riboswitch Structures via Single Molecule Accessibility Analysis.Methods in molecular biology (Clifton, N.J.) · 2023Article
- Potential effects of metal ion induced two-state allostery on the regulatory mechanism of add adenine riboswitch.Communications biology · 2022Article
- Precise tuning of bacterial translation initiation by non-equilibrium 5'-UTR unfolding observed in single mRNAs.Nucleic acids research · 2022Article
- Dynamics of metal binding and mutation in yybP-ykoY riboswitch ofRSC advances · 2022Article
- Refining the RNA Force Field with Small-Angle X-ray Scattering of Helix-Junction-Helix RNA.The journal of physical chemistry letters · 2022Article
- An anionic ligand snap-locks a long-range interaction in a magnesium-folded riboswitch.Nature communications · 2022Article
- The International Society of RNA Nanotechnology and Nanomedicine (ISRNN): The Present and Future of the Burgeoning Field.ACS nano · 2021Article
- Fluorogenic aptamers resolve the flexibility of RNA junctions using orientation-dependent FRET.RNA (New York, N.Y.) · 2021Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
9 authors.
Krishna C SuddalaSingle Molecule Analysis Group and Center for RNA Biomedicine, Department of Chemistry, University of Michigan, Ann Arbor, MI, 48109, USA.ORCID http://orcid.org/0000-0003-1597-2622
Ian R PriceDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, NY, 14850, USA.ORCID http://orcid.org/0000-0002-9596-1036
Shiba S DandpatSingle Molecule Analysis Group and Center for RNA Biomedicine, Department of Chemistry, University of Michigan, Ann Arbor, MI, 48109, USA.
Michal JanečekInstitute of Biophysics of the Czech Academy of Sciences, Kralovopolská 135, Brno, 612 65, Czech Republic.ORCID http://orcid.org/0000-0003-4599-2640
Petra KührováDepartment of Physical Chemistry, Faculty of Science, Palacký University, tř. 17 listopadu 12, Olomouc, 771 46, Czech Republic.
Jiří ŠponerInstitute of Biophysics of the Czech Academy of Sciences, Kralovopolská 135, Brno, 612 65, Czech Republic.ORCID http://orcid.org/0000-0001-6558-6186
Pavel BanášInstitute of Biophysics of the Czech Academy of Sciences, Kralovopolská 135, Brno, 612 65, Czech Republic.ORCID http://orcid.org/0000-0002-7137-8225
Ailong KeDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, NY, 14850, USA. ailong.ke@cornell.edu.ORCID http://orcid.org/0000-0001-5957-7822
Nils G WalterSingle Molecule Analysis Group and Center for RNA Biomedicine, Department of Chemistry, University of Michigan, Ann Arbor, MI, 48109, USA. nwalter@umich.edu.ORCID http://orcid.org/0000-0002-7301-1275
Funding
User Training and OutreachP30GM124165 · NIGMS · CORNELL UNIVERSITY · PI Nozomi Ando, J Christopher Fromme · 2018 to 2026
$34.2MMechanistic Investigation of RNA-Mediated Gene Regulation and ImmunityR35GM118174 · NIGMS · YALE UNIVERSITY · PI AILONG KE · 2016 to 2026
$7.9MU-turn of the Hepatitis Delta Virus RibozymeR01GM062357 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI WALTER, NILS G · 2001 to 2019
$5.8MPixel Array Detector for X-ray CrystallographyS10RR029205 · NCRR · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2010 to 2010
$1.8MCotranscriptional folding of single riboswitchesR01GM118524 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI WALTER, NILS G · 2016 to 2018
$911kNCRR NIH HHS S10 RR029205NIGMS NIH HHS P30 GM124165NIGMS NIH HHS R01 GM062357NIGMS NIH HHS R01 GM118524NIGMS NIH HHS R35 GM118174
Abstract
The widespread Mn
Indexed as
Signal TransductionBinding SitesCrystallography, X-RayEscherichia coliGene Expression Regulation, BacterialLactococcus lactisLigandsMagnesiumManganeseModels, MolecularMolecular ConformationMolecular Dynamics SimulationMutationNucleic Acid ConformationRiboswitchRNA, BacterialLigandsMagnesiumManganeseRiboswitchRNA, Bacterial
Identifiers
What OpenQuestion holds
Textmetadata
LicenceCC BY
Read underepoch 390
Registered trials
None linked
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.