Evidence map›Paper›PMID 31540706›Full record

ArticleBiophysical journal2019

Quantifying Dynamics in Phase-Separated Condensates Using Fluorescence Recovery after Photobleaching.

Nicole O Taylor, Ming-Tzo Wei, Howard A Stone, Clifford P Brangwynne

Abstract read
In one paragraph

Article in Biophysical journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 203 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
203citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

203 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  6. G-Quadruplexes: Structural Diversity and Emerging Roles in Biomolecular Condensation.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Review
  7. Review
  8. The exchange dynamics of client molecules in biomolecular condensates.bioRxiv : the preprint server for biology · 2026
    Article
  9. Single-Molecule Dwell Times in Biomolecular Condensates.bioRxiv : the preprint server for biology · 2026
    Article
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143 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Nicole O TaylorDepartment of Chemical and Biological Engineering.
Ming-Tzo WeiDepartment of Chemical and Biological Engineering.
Howard A StoneDepartment of Mechanical and Aerospace Engineering, Princeton University, Princeton, New Jersey. Electronic address: hastone@princeton.edu.
Clifford P BrangwynneDepartment of Chemical and Biological Engineering; Howard Hughes Medical Institute, Princeton University, Princeton, New Jersey. Electronic address: cbrangwy@princeton.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cells contain numerous membraneless organelles that assemble by intracellular liquid-liquid phase separation. The viscous properties and associated biomolecular mobility within these condensed phase droplets, or condensates, are increasingly recognized as important for cellular function and also dysfunction, for example, in protein aggregation pathologies. Fluorescence recovery after photobleaching (FRAP) is widely used to assess condensate fluidity and to estimate protein diffusion coefficients. However, the models and assumptions utilized in FRAP analysis of protein condensates are often not carefully considered. Here, we combine FRAP experiments on both in vitro reconstituted droplets and intracellular condensates with systematic examination of different models that can be used to fit the data and evaluate the impact of model choice on measured values. A key finding is that model boundary conditions can give rise to widely divergent measured values. This has important implications, for example, in experiments that bleach subregions versus the entire condensate, two commonly employed experimental approaches. We suggest guidelines for determining the appropriate modeling framework and highlight emerging questions about the molecular dynamics at the droplet interface. The ability to accurately determine biomolecular mobility both in the condensate interior and at the interface is important for obtaining quantitative insights into condensate function, a key area for future research.

Indexed as

Fluorescence Recovery After PhotobleachingCaenorhabditis elegans ProteinsHEK293 CellsHumansRNA HelicasesCaenorhabditis elegans Proteinslaf-1 protein, C elegansRNA Helicases

Identifiers

PMID31540706
PMCPMC6818185

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.