Evidence map›Paper›PMID 31538426›Full record

ArticleYonsei medical journal2019

Integrating a Next Generation Sequencing Panel into Clinical Practice in Ovarian Cancer.

Yong Jae Lee, Dachan Kim, Hyun Soo Kim, Kiyong Na, Jung Yun Lee, Eun Ji Nam, Sang Wun Kim, Sunghoon Kim, Young Tae Kim

Open access · goldAbstract read
In one paragraph

Article in Yonsei medical journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 18 citations in OpenAlex.

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  11. c-MYC and Epithelial Ovarian Cancer.Frontiers in oncology · 2021
    Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Yong Jae LeeDepartment of Obstetrics and Gynecology, Institute of Women's Life Medical Science, Yonsei University College of Medicine, Seoul, Korea.ORCID https://orcid.org/0000-0003-0297-3116
Dachan KimDepartment of Obstetrics and Gynecology, Institute of Women's Life Medical Science, Yonsei University College of Medicine, Seoul, Korea.ORCID https://orcid.org/0000-0001-5196-8482
Hyun Soo KimDepartment of Pathology, Severance Hospital, Yonsei University College of Medicine, Seoul, Korea.ORCID https://orcid.org/0000-0002-2356-7822
Kiyong NaDepartment of Pathology, Severance Hospital, Yonsei University College of Medicine, Seoul, Korea.ORCID https://orcid.org/0000-0003-4220-6755
Jung Yun LeeDepartment of Obstetrics and Gynecology, Institute of Women's Life Medical Science, Yonsei University College of Medicine, Seoul, Korea. jungyunlee@yuhs.ac.ORCID https://orcid.org/0000-0001-7948-1350
Eun Ji NamDepartment of Obstetrics and Gynecology, Institute of Women's Life Medical Science, Yonsei University College of Medicine, Seoul, Korea.ORCID https://orcid.org/0000-0003-0189-3560
Sang Wun KimDepartment of Obstetrics and Gynecology, Institute of Women's Life Medical Science, Yonsei University College of Medicine, Seoul, Korea.ORCID https://orcid.org/0000-0002-8342-8701
Sunghoon KimDepartment of Obstetrics and Gynecology, Institute of Women's Life Medical Science, Yonsei University College of Medicine, Seoul, Korea.ORCID https://orcid.org/0000-0002-1645-7473
Young Tae KimDepartment of Obstetrics and Gynecology, Institute of Women's Life Medical Science, Yonsei University College of Medicine, Seoul, Korea.ORCID https://orcid.org/0000-0002-7347-1052
Yonsei University · KR

Funding

National Research Foundation of Korea 2016R1D1A1B03931916National Research Foundation of Korea 2017M3A9E8029714Yonsei University College of Medicine 6-2018-0169
6 · The paper itself

Abstract

purposeFew efforts have been made to integrate a next generation sequencing (NGS) panel into standard clinical treatment of ovarian cancer. The aim of this study was to investigate the clinical utility of NGS and to identify clinically impactful information beyond targetable alterations. MATERIALS AND

methodsWe conducted a retrospective review of 84 patients with ovarian cancer who underwent NGS between March 1, 2017, and July 31, 2018, at the Yonsei Cancer Hospital. We extracted DNA from formalin-fixed, paraffin-embedded tissue samples of ovarian cancer. The TruSight Tumor 170 gene panel was used to prepare libraries, and the MiSeq instrument was used for NGS.

resultsOf the 84 patients, 55 (65.1%) had high-grade serous carcinomas. Seventy-three (86.7%) patients underwent NGS at the time of diagnosis, and 11 (13.3%) underwent NGS upon relapse. The most common genetic alterations were in

conclusionImplementation of NGS may help in identifying patients who might benefit from targeted treatment therapies and genetic counseling.

Indexed as

Practice Patterns, Physicians'AdultAgedDNA Copy Number VariationsFemaleGenome, HumanHigh-Throughput Nucleotide SequencingHumansMiddle AgedMolecular Targeted TherapyMutationOvarian NeoplasmsRetrospective StudiesNext generation sequencingovarian cancertargetable alterations

Identifiers

PMID31538426
PMCPMC6753345
OpenAlexW2973751380

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.