Evidence map›Paper›PMID 31537866›Full record

ArticleScientific reports2019

The diversity and ecological roles of Penicillium in intertidal zones.

Myung Soo Park, Seung-Yoon Oh, Jonathan J Fong, Jos Houbraken, Young Woon Lim

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 62 citations in OpenAlex.

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  13. Isolation and Identification ofArchives of Razi Institute · 2022
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  15. Three newPeerJ · 2022
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  16. Two New SexualJournal of fungi (Basel, Switzerland) · 2021
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  20. Mycobiology · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Myung Soo ParkSchool of Biological Sciences and Institute of Microbiology, Seoul National University, Seoul, 08826, South Korea.
Seung-Yoon OhSchool of Biological Sciences and Institute of Microbiology, Seoul National University, Seoul, 08826, South Korea.ORCID http://orcid.org/0000-0002-9745-1849
Jonathan J FongScience Unit, Lingnan University, Tuen Mun, Hong Kong.ORCID http://orcid.org/0000-0002-3648-6730
Jos HoubrakenWesterdijk Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT, Utrecht, Netherlands.
Young Woon LimSchool of Biological Sciences and Institute of Microbiology, Seoul National University, Seoul, 08826, South Korea. ywlim@snu.ac.kr.
Seoul National University · KRWesterdijk Fungal Biodiversity Institute · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Members of the genus Penicillium are commonly isolated from various terrestrial and marine environments, and play an important ecological role as a decomposer. To gain insight into the ecological role of Penicillium in intertidal zones, we investigated the Penicillium diversity and community structure using a culture-dependent technique and a culture independent metagenomic approach using ITS (ITS-NGS) and partial β-tubulin (BenA-NGS) as targets. The obtained isolates were tested for halotolerance, enzyme activity, and polycyclic aromatic hydrocarbons (PAHs) degradation. A total of 96 Penicillium species were identified from the investigated intertidal zones. Although the BenA-NGS method was efficient for detecting Penicillium, some species were only detected using conventional isolation and/or the ITS-NGS method. The Penicillium community displayed a significant degree of variation relative to season (summer and winter) and seaside (western and southern coast). Many Penicillium species isolated in this study exhibited cellulase and protease activity, and/or degradation of PAHs. These findings support the important role of Penicillium in the intertidal zone for nutrient recycling and pollutant degradation.

Indexed as

ClassificationDNA, FungalEnzyme ActivationGeologic SedimentsPenicilliumPhylogenyPolycyclic Aromatic HydrocarbonsSequence Analysis, DNATidal WavesDNA, FungalPolycyclic Aromatic Hydrocarbons

Identifiers

PMID31537866
PMCPMC6753150
OpenAlexW2973670047

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.