Evidence map›Paper›PMID 31537780›Full record

ArticleNature communications2019

Enhancing and shaping the immunogenicity of native-like HIV-1 envelope trimers with a two-component protein nanoparticle.

Philip J M Brouwer, Aleksandar Antanasijevic, Zachary Berndsen, Anila Yasmeen, Brooke Fiala, Tom P L Bijl, Ilja Bontjer, Jacob B Bale, William Sheffler, Joel D Allen and 21 more

Abstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 136 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
136citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

136 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Controlling timing and location in vaccines.Advanced drug delivery reviews · 2020
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  17. From sequence to scaffold: Computational design of protein nanoparticle vaccines from AlphaFold2-predicted building blocks.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
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76 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

31 authors.

Philip J M BrouwerAmsterdam UMC, Department of Medical Microbiology, Amsterdam Infection & Immunity Institute, University of Amsterdam, Amsterdam, 1105AZ, The Netherlands.ORCID http://orcid.org/0000-0002-2902-7739
Aleksandar AntanasijevicDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, California, 92037, USA.
Zachary BerndsenDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, California, 92037, USA.
Anila YasmeenDepartment of Microbiology and Immunology, Weill Medical College of Cornell University, New York, New York, 10065, USA.
Brooke FialaDepartment of Biochemistry, University of Washington, Seattle, Washington, 98195, USA.
Tom P L BijlAmsterdam UMC, Department of Medical Microbiology, Amsterdam Infection & Immunity Institute, University of Amsterdam, Amsterdam, 1105AZ, The Netherlands.
Ilja BontjerAmsterdam UMC, Department of Medical Microbiology, Amsterdam Infection & Immunity Institute, University of Amsterdam, Amsterdam, 1105AZ, The Netherlands.
Jacob B BaleDepartment of Biochemistry, University of Washington, Seattle, Washington, 98195, USA.ORCID http://orcid.org/0000-0003-2444-5875
William ShefflerDepartment of Biochemistry, University of Washington, Seattle, Washington, 98195, USA.
Joel D AllenBiological Sciences and Institute of Life Sciences, University of Southampton, SO17 1BJ, Southampton, UK.ORCID http://orcid.org/0000-0003-2547-968X
Anna SchorchtAmsterdam UMC, Department of Medical Microbiology, Amsterdam Infection & Immunity Institute, University of Amsterdam, Amsterdam, 1105AZ, The Netherlands.
Judith A BurgerAmsterdam UMC, Department of Medical Microbiology, Amsterdam Infection & Immunity Institute, University of Amsterdam, Amsterdam, 1105AZ, The Netherlands.
Miguel CamachoAmsterdam UMC, Department of Medical Microbiology, Amsterdam Infection & Immunity Institute, University of Amsterdam, Amsterdam, 1105AZ, The Netherlands.
Daniel EllisDepartment of Biochemistry, University of Washington, Seattle, Washington, 98195, USA.
Christopher A CottrellDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, California, 92037, USA.ORCID http://orcid.org/0000-0002-3364-3083
Anna-Janina BehrensDepartment of Biochemistry, Oxford Glycobiology Institute, University of Oxford, OX1 3QU, Oxford, UK.
Marco CatalanoAmsterdam UMC, Department of Medical Microbiology, Amsterdam Infection & Immunity Institute, University of Amsterdam, Amsterdam, 1105AZ, The Netherlands.
Iván Del Moral-SánchezAmsterdam UMC, Department of Medical Microbiology, Amsterdam Infection & Immunity Institute, University of Amsterdam, Amsterdam, 1105AZ, The Netherlands.
Thomas J KetasDepartment of Microbiology and Immunology, Weill Medical College of Cornell University, New York, New York, 10065, USA.
Celia LaBrancheDepartment of Surgery, Duke University Medical Center, Durham, North Carolina, 27710, USA.
Marit J van GilsAmsterdam UMC, Department of Medical Microbiology, Amsterdam Infection & Immunity Institute, University of Amsterdam, Amsterdam, 1105AZ, The Netherlands.ORCID http://orcid.org/0000-0003-3422-8161
Kwinten SliepenAmsterdam UMC, Department of Medical Microbiology, Amsterdam Infection & Immunity Institute, University of Amsterdam, Amsterdam, 1105AZ, The Netherlands.ORCID http://orcid.org/0000-0003-1414-0648
Lance J StewartDepartment of Biochemistry, University of Washington, Seattle, Washington, 98195, USA.
Max CrispinBiological Sciences and Institute of Life Sciences, University of Southampton, SO17 1BJ, Southampton, UK.
David C MontefioriDepartment of Surgery, Duke University Medical Center, Durham, North Carolina, 27710, USA.
David BakerDepartment of Biochemistry, University of Washington, Seattle, Washington, 98195, USA.ORCID http://orcid.org/0000-0001-7896-6217
John P MooreDepartment of Microbiology and Immunology, Weill Medical College of Cornell University, New York, New York, 10065, USA.ORCID http://orcid.org/0000-0002-9902-6096
Per Johan KlasseDepartment of Microbiology and Immunology, Weill Medical College of Cornell University, New York, New York, 10065, USA.
Andrew B WardDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, California, 92037, USA.ORCID http://orcid.org/0000-0001-7153-3769
Neil P KingDepartment of Biochemistry, University of Washington, Seattle, Washington, 98195, USA. neilking@uw.edu.
Rogier W SandersAmsterdam UMC, Department of Medical Microbiology, Amsterdam Infection & Immunity Institute, University of Amsterdam, Amsterdam, 1105AZ, The Netherlands. r.w.sanders@amc.uva.nl.

Funding

Structural studies of native-like SOSIP trimersP01AI110657 · NIAID · WEILL MEDICAL COLL OF CORNELL UNIV · PI MOORE, JOHN P · 2015 to 2024
$35.4M
Broadening autologous Tier 2 anti-HIV neutralizing antibodiesF31AI131873 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI COTTRELL, CHRISTOPHER ANDREW · 2017 to 2020
$95k
NIAID NIH HHS F31 AI131873NIAID NIH HHS P01 AI110657
6 · The paper itself

Abstract

The development of native-like HIV-1 envelope (Env) trimer antigens has enabled the induction of neutralizing antibody (NAb) responses against neutralization-resistant HIV-1 strains in animal models. However, NAb responses are relatively weak and narrow in specificity. Displaying antigens in a multivalent fashion on nanoparticles (NPs) is an established strategy to increase their immunogenicity. Here we present the design and characterization of two-component protein NPs displaying 20 stabilized SOSIP trimers from various HIV-1 strains. The two-component nature permits the incorporation of exclusively well-folded, native-like Env trimers into NPs that self-assemble in vitro with high efficiency. Immunization studies show that the NPs are particularly efficacious as priming immunogens, improve the quality of the Ab response over a conventional one-component nanoparticle system, and are most effective when SOSIP trimers with an apex-proximate neutralizing epitope are displayed. Their ability to enhance and shape the immunogenicity of SOSIP trimers make these NPs a promising immunogen platform.

Indexed as

AIDS VaccinesAnimalsAntibodies, NeutralizingAntigens, ViralCell Lineenv Gene Products, Human Immunodeficiency VirusEpitopesHEK293 CellsHIV-1HIV AntibodiesHumansMolecular Docking SimulationNanoparticlesProtein MultimerizationProtein Structure, TertiaryRabbitsAIDS VaccinesAntibodies, NeutralizingAntigens, Viralenv Gene Products, Human Immunodeficiency VirusEpitopesHIV Antibodies

Identifiers

PMID31537780
PMCPMC6753213

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.