Evidence map›Paper›PMID 31535295›Full record

ArticleAMB Express2019

The first fungal laccase with an alkaline pH optimum obtained by directed evolution and its application in indigo dye decolorization.

Qiang Yin, Gang Zhou, Can Peng, Yinliang Zhang, Ursula Kües, Juanjuan Liu, Yazhong Xiao, Zemin Fang

Open access · goldAbstract read
In one paragraph

Article in AMB Express, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
14.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 99 citations in OpenAlex.

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  15. Review
  16. Article
  17. Article
  18. Article
  19. Characterization of a New Laccase fromMolecules (Basel, Switzerland) · 2023
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Qiang YinSchool of Life Sciences, Anhui University, Hefei, 230601, China.
Gang ZhouSchool of Life Sciences, Anhui University, Hefei, 230601, China.
Can PengSchool of Life Sciences, Anhui University, Hefei, 230601, China.
Yinliang ZhangSchool of Life Sciences, Anhui University, Hefei, 230601, China.
Ursula KüesMolecular Wood Biotechnology and Technical Mycology, Büsgen-Institute, University of Goettingen, Büsgenweg 2, 37077, Göttingen, Germany.
Juanjuan LiuSchool of Life Sciences, Anhui University, Hefei, 230601, China.
Yazhong XiaoSchool of Life Sciences, Anhui University, Hefei, 230601, China. yzxiao@ahu.edu.cn.
Zemin FangSchool of Life Sciences, Anhui University, Hefei, 230601, China. zemin_fang@ahu.edu.cn.ORCID http://orcid.org/0000-0003-4634-5920
Anhui University · CNUniversity of Göttingen · DE

Funding

Doctoral Research Start-up Funding of Anhui University Y040418162Doctoral Research Start-up Funding of Anhui University Y040438001Natural Science Foundation of China 31300044Natural Science Foundation of China 31600078Open Fund for Discipline Construction, Institute of Physical Science S030162001/016
6 · The paper itself

Abstract

Engineering of fungal laccases with optimum catalytic activity at alkaline pH has been a long-lasting challenge. In this study, a mutant library containing 3000 clones was obtained by error-prone PCR to adapt the optimum pH of a fungal laccase Lcc9 from the basidiomycete Coprinopsis cinerea. After three rounds of functional screening, a mutant with three amino acid changes (E116K, N229D, I393T) named PIE5 was selected. PIE5 showed an optimum pH of 8.5 and 8.0 against guaiacol and 2,6-DMP when expressed in Pichia pastoris, representing the first fungal laccase that possesses an optimum pH at an alkaline condition. Site directed mutagenesis disclosed that N229D contributed the most to the optimum pH increment. A single N229D mutation caused an increase in optimum pH by 1.5 units. When used in indigo dye decolorization, PIE5 efficiently decolorized 87.1 ± 1.1% and 90.9 ± 0.3% indigo dye at the optimum conditions of pH 7.0-7.5 and 60 °C, and with either methyl 3,5-dimethoxy-4-hydroxybenzoate or 2,2'-azino-bis(3-ethylbenzothazoline-6-sulfonate) as the mediator. In comparison, the commercially available fungal laccase TvLac from Trametes villosa decolorized 84.3 ± 1.8% of indigo dye under its optimum conditions (opt. pH 5.0 and 60 °C). The properties of an alkaline-dependent activity and the high indigo dye decolorization ability (1.3-fold better than the parental Lcc9) make the new fungal laccase PIE5 an alternative for specific industrial applications.

Indexed as

Alkaline pH activityDecolorizationDirected evolutionFungal laccaseIndigo dye

Identifiers

PMID31535295
PMCPMC6751238
OpenAlexW2973874164

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.