Evidence map›Paper›PMID 31535126›Full record

Observational studyMedical mycology2020

Histopathological study on the prevalence of trichosporonosis in formalin-fixed and paraffin-embedded tissue autopsy sections by in situ hybridization with peptide nucleic acid probe.

Sota Sadamoto, Minoru Shinozaki, Minoru Nagi, Yasuhiro Nihonyanagi, Kozue Ejima, Aki Mitsuda, Megumi Wakayama, Naobumi Tochigi, Yoshitaka Murakami, Tsunekazu Hishima and 4 more

Open access · greenAbstract readMulticenter StudyObservational Study
In one paragraph

Observational study in Medical mycology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 2 countries.

Sota SadamotoDepartment of Surgical Pathology, Toho University Graduate School of Medicine.
Minoru ShinozakiDepartment of Surgical Pathology, Toho University School of Medicine.
Minoru NagiDepartment of Chemotherapy and Mycoses, National Institute of infectious Disease.
Yasuhiro NihonyanagiDepartment of Surgical Pathology, Toho University Graduate School of Medicine.
Kozue EjimaDepartment of Surgical Pathology, Toho University School of Medicine.
Aki MitsudaDepartment of Surgical Pathology, Toho University School of Medicine.
Megumi WakayamaDepartment of Surgical Pathology, Toho University School of Medicine.
Naobumi TochigiDepartment of Surgical Pathology, Toho University School of Medicine.
Yoshitaka MurakamiDepartment of Medical Statistics, Toho University School of Medicine.
Tsunekazu HishimaDepartment of Pathology, Tokyo Metropolitan Cancer and Infectious Diseases Center Komagome Hospital.
Tetsuo NemotoDepartment of Surgical Pathology, Toho University School of Medicine.
Shigeki NakamuraDepartment of Chemotherapy and Mycoses, National Institute of infectious Disease.
Yoshitsugu MiyazakiDepartment of Chemotherapy and Mycoses, National Institute of infectious Disease.
Kazutoshi ShibuyaDepartment of Surgical Pathology, Toho University Graduate School of Medicine.
Toho University · JPNational Institute of Infectious Diseases · JPShowa University Northern Yokohama Hospital · JPTokyo Medical University · JPTokyo Metropolitan Komagome Hospital · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Trichosporon species are some of the most common pathogenic yeasts in Asia, and many are resistant to echinocandin antifungal drugs. Effective treatment of fungal infections requires the selection of appropriate antifungals and the accurate identification of the causal organism. However, in histopathological specimens Trichosporon spp. are often misidentified as Candida species due to morphological similarities. In situ hybridization (ISH) is a useful technique for identifying fungal species in formalin-fixed and paraffin-embedded (FFPE) tissue sections. Although many novel probes for ISH are available, the practical use of ISH for identification of fungi remains limited, in part due to the lack of adequate verifications. We conducted a two-center retrospective observational study in which the ISH technique was used to differentiate Trichosporon spp. and C. albicans in FFPE tissue from autopsy specimens. The study included 88 cases with blood stream yeast infection without Cryptococci extracted from 459 autopsy files of cases with proven invasive fungal infection (IFI). Positive signals for the Trichosporon spp. protein nucleic acid (PNA) probe and C. albicans PNA probe were seen for 7 and 35 cases, respectively, whereas the remaining 46 were negative for both. For the Trichosporon spp.- positive specimens, 5/7 were reported as candidiasis in autopsy records. Our results suggested that accurate histological identification of fungal infections remains challenging, but ISH may be a suitable approach to support histological findings. In addition, this retrospective study suggested that trichosporonosis may have high prevalence among cases of bloodstream yeast infections in Japan.

Indexed as

In Situ HybridizationPeptide Nucleic AcidsAdolescentAdultAgedAged, 80 and overAutopsyChildChild, PreschoolFemaleFormaldehydeHumansInfantInfant, NewbornJapanMaleFormaldehydeOligonucleotide ProbesPeptide Nucleic Acidsin situ hybridizationinvasive fungal infectionTrichosporon

Identifiers

PMID31535126
PMCPMC7261608
OpenAlexW2973261485

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.