Evidence map›Paper›PMID 31531998›Full record

ArticleThe EMBO journal2019

An oligomeric state-dependent switch in the ER enzyme FICD regulates AMPylation and deAMPylation of BiP.

Luke A Perera, Claudia Rato, Yahui Yan, Lisa Neidhardt, Stephen H McLaughlin, Randy J Read, Steffen Preissler, David Ron

Abstract read
In one paragraph

Article in The EMBO journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed.

  1. bioRxiv : the preprint server for biology · 2026
    Article
  2. Immunoglobulin binding protein (BiP) forms two types of dimers.Protein science : a publication of the Protein Society · 2026
    Article
  3. Article
  4. Inhibition of FicD-mediated AMPylation and deAMPylation by isoprenoid diphosphates.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  5. Article
  6. Conformational plasticity of a BiP-GRP94 chaperone complex.Nature structural & molecular biology · 2025
    Article
  7. Review
  8. The functional dynamics of FicD's TPR domain are modulated by the interaction with ATP and BiP.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. FicD sensitizes cellular response to glucose fluctuations in mouse embryonic fibroblasts.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  16. Article
  17. Article
  18. Article
  19. AMPylation and Endoplasmic Reticulum Protein Folding Homeostasis.Cold Spring Harbor perspectives in biology · 2023
    Review
  20. The Alarmone Diadenosine Tetraphosphate as a Cosubstrate for Protein AMPylation.Angewandte Chemie (International ed. in English) · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Luke A PereraCambridge Institute for Medical Research, University of Cambridge, Cambridge, UK.ORCID 0000-0002-0032-1176
Claudia RatoCambridge Institute for Medical Research, University of Cambridge, Cambridge, UK.ORCID 0000-0002-3971-046X
Yahui YanCambridge Institute for Medical Research, University of Cambridge, Cambridge, UK.ORCID 0000-0001-6934-9874
Lisa NeidhardtCambridge Institute for Medical Research, University of Cambridge, Cambridge, UK.ORCID 0000-0003-0256-5040
Stephen H McLaughlinMRC Laboratory of Molecular Biology, Cambridge, UK.ORCID 0000-0001-9135-6253
Randy J ReadCambridge Institute for Medical Research, University of Cambridge, Cambridge, UK.ORCID 0000-0001-8273-0047
Steffen PreisslerCambridge Institute for Medical Research, University of Cambridge, Cambridge, UK.ORCID 0000-0001-7936-9836
David RonCambridge Institute for Medical Research, University of Cambridge, Cambridge, UK.ORCID 0000-0002-3014-5636

Funding

Medical Research Council MC_U105184326Wellcome Trust 209407/Z/17/Z
6 · The paper itself

Abstract

AMPylation is an inactivating modification that alters the activity of the major endoplasmic reticulum (ER) chaperone BiP to match the burden of unfolded proteins. A single ER-localised Fic protein, FICD (HYPE), catalyses both AMPylation and deAMPylation of BiP. However, the basis for the switch in FICD's activity is unknown. We report on the transition of FICD from a dimeric enzyme, that deAMPylates BiP, to a monomer with potent AMPylation activity. Mutations in the dimer interface, or of residues along an inhibitory pathway linking the dimer interface to the enzyme's active site, favour BiP AMPylation in vitro and in cells. Mechanistically, monomerisation relieves a repressive effect allosterically propagated from the dimer interface to the inhibitory Glu234, thereby permitting AMPylation-competent binding of MgATP. Moreover, a reciprocal signal, propagated from the nucleotide-binding site, provides a mechanism for coupling the oligomeric state and enzymatic activity of FICD to the energy status of the ER.

Indexed as

Protein MultimerizationProtein Processing, Post-TranslationalEndoplasmic ReticulumEndoplasmic Reticulum Chaperone BiPHeat-Shock ProteinsHEK293 CellsHumansMembrane ProteinsNucleotidyltransferasesProtein ConformationEndoplasmic Reticulum Chaperone BiPFICD protein, humanHeat-Shock ProteinsMembrane ProteinsNucleotidyltransferasesAMPylationBiPdeAMPylationendoplasmic reticulumFICD

Identifiers

PMID31531998
PMCPMC6826200

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.