Evidence map›Paper›PMID 31531123›Full record

ArticleComputational and mathematical methods in medicine2019

Prediction of Protein-Protein Interactions Based on Domain.

Xue Li, Lifeng Yang, Xiaopan Zhang, Xiong Jiao

Abstract read
In one paragraph

Article in Computational and mathematical methods in medicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Reconstruction ofCurrent issues in molecular biology · 2024
    Article
  2. Article
  3. Article
  4. Protein-protein interaction prediction with deep learning: A comprehensive review.Computational and structural biotechnology journal · 2022
    Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Xue LiCollege of Biomedical Engineering, Taiyuan University of Technology, Taiyuan 030600, China.
Lifeng YangCollege of Information and Computer, Taiyuan University of Technology, Taiyuan 030600, China.
Xiaopan ZhangDepartment of MRI, The First Affiliated Hospital of Zhengzhou University, Zhengzhou 450052, China.
Xiong JiaoCollege of Biomedical Engineering, Taiyuan University of Technology, Taiyuan 030600, China.ORCID https://orcid.org/0000-0002-0661-8595

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Protein-protein interactions (PPIs) play a crucial role in various biological processes. To better comprehend the pathogenesis and treatments of various diseases, it is necessary to learn the detail of these interactions. However, the current experimental method still has many false-positive and false-negative problems. Computational prediction of protein-protein interaction has become a more important prediction method which can overcome the obstacles of the experimental method. In this work, we proposed a novel computational domain-based method for PPI prediction, and an SVM model for the prediction was built based on the physicochemical property of the domain. The outcomes of SVM and the domain-domain score were used to construct the prediction model for protein-protein interaction. The predicted results demonstrated the domain-based research can enhance the ability to predict protein interactions.

Indexed as

Protein Interaction Domains and MotifsDatabases, ProteinHumansMathematical ConceptsProtein Interaction MappingProtein Interaction MapsProteinsSupport Vector MachineProteins

Identifiers

PMID31531123
PMCPMC6720845

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.