Evidence map›Paper›PMID 31530810›Full record

ArticleNature communications2019

Evolutionary and functional impact of common polymorphic inversions in the human genome.

Carla Giner-Delgado, Sergi Villatoro, Jon Lerga-Jaso, Magdalena Gayà-Vidal, Meritxell Oliva, David Castellano, Lorena Pantano, Bárbara D Bitarello, David Izquierdo, Isaac Noguera and 10 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed, 1 pooled it
8.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 1 synthesis or guideline pooled it, 80 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. A century of theories of balancing selection.Biological reviews of the Cambridge Philosophical Society · 2026
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. An Assay for Variable Fragment Length Allele-Specific Genotyping.Methods in molecular biology (Clifton, N.J.) · 2025
    Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Review
  19. Article
  20. Inferring Balancing Selection From Genome-Scale Data.Genome biology and evolution · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 8 institutions in 6 countries.

Carla Giner-DelgadoInstitut de Biotecnologia i de Biomedicina, Universitat Autònoma de Barcelona, Bellaterra, Barcelona, 08193, Spain.ORCID http://orcid.org/0000-0002-1429-6768
Sergi VillatoroInstitut de Biotecnologia i de Biomedicina, Universitat Autònoma de Barcelona, Bellaterra, Barcelona, 08193, Spain.ORCID http://orcid.org/0000-0001-6940-2866
Jon Lerga-JasoInstitut de Biotecnologia i de Biomedicina, Universitat Autònoma de Barcelona, Bellaterra, Barcelona, 08193, Spain.
Magdalena Gayà-VidalInstitut de Biotecnologia i de Biomedicina, Universitat Autònoma de Barcelona, Bellaterra, Barcelona, 08193, Spain.ORCID http://orcid.org/0000-0002-7042-8948
Meritxell OlivaInstitut de Biotecnologia i de Biomedicina, Universitat Autònoma de Barcelona, Bellaterra, Barcelona, 08193, Spain.
David CastellanoInstitut de Biotecnologia i de Biomedicina, Universitat Autònoma de Barcelona, Bellaterra, Barcelona, 08193, Spain.ORCID http://orcid.org/0000-0001-8778-6007
Lorena PantanoInstitut de Biotecnologia i de Biomedicina, Universitat Autònoma de Barcelona, Bellaterra, Barcelona, 08193, Spain.ORCID http://orcid.org/0000-0002-3859-3249
Bárbara D BitarelloDepartment of Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, Leipzig, Saxony, 04103, Germany.ORCID http://orcid.org/0000-0001-7676-9367
David IzquierdoInstitut de Biotecnologia i de Biomedicina, Universitat Autònoma de Barcelona, Bellaterra, Barcelona, 08193, Spain.ORCID http://orcid.org/0000-0001-7790-0339
Isaac NogueraInstitut de Biotecnologia i de Biomedicina, Universitat Autònoma de Barcelona, Bellaterra, Barcelona, 08193, Spain.
Iñigo OlaldeInstitute of Evolutionary Biology, CSIC-Universitat Pompeu Fabra, Barcelona, 08003, Spain.
Alejandra DelpratInstitut de Biotecnologia i de Biomedicina, Universitat Autònoma de Barcelona, Bellaterra, Barcelona, 08193, Spain.
Antoine BlancherLaboratoire d'immunologie, CHU de Toulouse, IFB Hôpital Purpan, Toulouse, 31059, France.
Carles Lalueza-FoxInstitute of Evolutionary Biology, CSIC-Universitat Pompeu Fabra, Barcelona, 08003, Spain.ORCID http://orcid.org/0000-0002-1730-5914
Tõnu EskoEstonian Genome Center, Institute of Genomics, University of Tartu, Tartu, 51010, Estonia.
Paul F O'ReillySocial, Genetic, and Developmental Psychiatry Centre, Institute of Psychiatry, Psychology and Neuroscience, King's College London, London, SE5 8AF, UK.ORCID http://orcid.org/0000-0001-7515-0845
Aida M AndrésDepartment of Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, Leipzig, Saxony, 04103, Germany.
Luca FerrettiBig Data Institute, Li Ka Shing Centre for Health Information and Discovery, University of Oxford, Oxford, OX3 7LF, UK.ORCID http://orcid.org/0000-0001-7578-7301
Marta PuigInstitut de Biotecnologia i de Biomedicina, Universitat Autònoma de Barcelona, Bellaterra, Barcelona, 08193, Spain.ORCID http://orcid.org/0000-0002-4439-6372
Mario CáceresInstitut de Biotecnologia i de Biomedicina, Universitat Autònoma de Barcelona, Bellaterra, Barcelona, 08193, Spain. mcaceres@icrea.cat.ORCID http://orcid.org/0000-0002-7736-3251
Universitat Autònoma de Barcelona · ESMax Planck Institute for Evolutionary Anthropology · DEUniversitat Pompeu Fabra · ESCentre National de la Recherche Scientifique · FRInstitució Catalana de Recerca i Estudis Avançats · ESKing's College London · GBUniversity of Oxford · GBUniversity of Tartu · EE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Inversions are one type of structural variants linked to phenotypic differences and adaptation in multiple organisms. However, there is still very little information about polymorphic inversions in the human genome due to the difficulty of their detection. Here, we develop a new high-throughput genotyping method based on probe hybridization and amplification, and we perform a complete study of 45 common human inversions of 0.1-415 kb. Most inversions promoted by homologous recombination occur recurrently in humans and great apes and they are not tagged by SNPs. Furthermore, there is an enrichment of inversions showing signatures of positive or balancing selection, diverse functional effects, such as gene disruption and gene-expression changes, or association with phenotypic traits. Therefore, our results indicate that the genome is more dynamic than previously thought and that human inversions have important functional and evolutionary consequences, making possible to determine for the first time their contribution to complex traits.

Indexed as

Chromosome InversionEvolution, MolecularGenome, HumanGenotyping TechniquesHumansPhenotypePolymorphism, Single Nucleotide

Identifiers

PMID31530810
PMCPMC6748972
OpenAlexW2974410476

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.