Evidence map›Paper›PMID 31530651›Full record

ArticleGenes & development2019

The Integrator complex cleaves nascent mRNAs to attenuate transcription.

Deirdre C Tatomer, Nathan D Elrod, Dongming Liang, Mei-Sheng Xiao, Jeffrey Z Jiang, Michael Jonathan, Kai-Lieh Huang, Eric J Wagner, Sara Cherry, Jeremy E Wilusz

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 99 papers.

0numbers the graph read from it
0cells of the map it votes in
99citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

99 citing papers in PubMed, 171 citations in OpenAlex.

  1. Review
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  3. Review
  4. Article
  5. Direct roles of long non-coding RNAs in transcription activation.Nature structural & molecular biology · 2026
    Review
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39 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Deirdre C TatomerDepartment of Biochemistry and Biophysics, University of Pennsylvania Perelman School of Medicine, Philadelphia, Pennsylvania 19104, USA.
Nathan D ElrodDepartment of Biochemistry and Molecular Biology, University of Texas Medical Branch at Galveston, Galveston, Texas 77550, USA.
Dongming LiangDepartment of Biochemistry and Biophysics, University of Pennsylvania Perelman School of Medicine, Philadelphia, Pennsylvania 19104, USA.
Mei-Sheng XiaoDepartment of Biochemistry and Biophysics, University of Pennsylvania Perelman School of Medicine, Philadelphia, Pennsylvania 19104, USA.
Jeffrey Z JiangDepartment of Biochemistry and Biophysics, University of Pennsylvania Perelman School of Medicine, Philadelphia, Pennsylvania 19104, USA.
Michael JonathanDepartment of Biochemistry and Biophysics, University of Pennsylvania Perelman School of Medicine, Philadelphia, Pennsylvania 19104, USA.
Kai-Lieh HuangDepartment of Biochemistry and Molecular Biology, University of Texas Medical Branch at Galveston, Galveston, Texas 77550, USA.
Eric J WagnerDepartment of Biochemistry and Molecular Biology, University of Texas Medical Branch at Galveston, Galveston, Texas 77550, USA.
Sara CherryDepartment of Microbiology, University of Pennsylvania Perelman School of Medicine, Philadelphia, Pennsylvania 19104, USA.
Jeremy E WiluszDepartment of Biochemistry and Biophysics, University of Pennsylvania Perelman School of Medicine, Philadelphia, Pennsylvania 19104, USA.
University of Pennsylvania · USThe University of Texas Medical Branch at Galveston · US

Funding

Probing the specificity and activity of the metazoan Integrator complexR01GM134539 · NIGMS · HARVARD MEDICAL SCHOOL · PI Karen L Adelman, ERIC J WAGNER · 2019 to 2026
$4.7M
The role of autophagy in innate anti-viral immunity in DrosophilaR01AI074951 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI CHERRY, SARA · 2007 to 2017
$4.2M
Regulatory roles for the Integrator complex and circular RNAsR35GM119735 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI WILUSZ, JEREMY E · 2016 to 2025
$4.1M
Antiviral immunity in the gut: how the intestinal epithelium and microbiota regulate infectionR01AI122749 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI CHERRY, SARA · 2016 to 2020
$2.0M
Regulation of mRNA transcription by the Integrator complexK99GM131028 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI TATOMER, DEIRDRE · 2019 to 2020
$180k
NIAID NIH HHS R01 AI074951NIAID NIH HHS R01 AI122749NIGMS NIH HHS K99 GM131028NIGMS NIH HHS R01 GM134539NIGMS NIH HHS R35 GM119735
6 · The paper itself

Abstract

Cellular homeostasis requires transcriptional outputs to be coordinated, and many events post-transcription initiation can dictate the levels and functions of mature transcripts. To systematically identify regulators of inducible gene expression, we performed high-throughput RNAi screening of the

Indexed as

Gene Expression RegulationAnimalsCell LineCopperDrosophilaDrosophila ProteinsEndoribonucleasesMetallothioneinPromoter Regions, GeneticProtein BindingRNA CleavageRNA, MessengerStress, PhysiologicalCopperDrosophila ProteinsEndoribonucleasesMetallothioneinRNA, MessengerIntS11Metallothionein AMtnARNA exosomeRNA polymerase IItranscription termination

Identifiers

PMID31530651
PMCPMC6824465
OpenAlexW2973809717

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.