Evidence map›Paper›PMID 31528353›Full record

ArticleFungal biology and biotechnology2019

The role of PKAc1 in gene regulation and trichodimerol production in

Wolfgang Hinterdobler, André Schuster, Doris Tisch, Ezgi Özkan, Hoda Bazafkan, Johann Schinnerl, Lothar Brecker, Stefan Böhmdorfer, Monika Schmoll

Open access · goldAbstract read
In one paragraph

Article in Fungal biology and biotechnology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
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  8. Strain improvement ofFrontiers in microbiology · 2023
    Review
  9. Article
  10. International journal of molecular sciences · 2022
    Article
  11. Review
  12. Article
  13. Understanding the Role ofJournal of fungi (Basel, Switzerland) · 2021
    Article
  14. Article
  15. Article
  16. Precision Engineering of the Transcription Factor Cre1 inFrontiers in bioengineering and biotechnology · 2020
    Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Wolfgang Hinterdobler1Center for Health and Bioresources, AIT Austrian Institute of Technology, Konrad Lorenz Strasse 24, 3430 Tulln, Austria.
André Schuster2Institute of Chemical Engineering, Vienna University of Technology, Getreidemarkt 9, 1060 Vienna, Austria.
Doris Tisch2Institute of Chemical Engineering, Vienna University of Technology, Getreidemarkt 9, 1060 Vienna, Austria.
Ezgi Özkan1Center for Health and Bioresources, AIT Austrian Institute of Technology, Konrad Lorenz Strasse 24, 3430 Tulln, Austria.
Hoda Bazafkan1Center for Health and Bioresources, AIT Austrian Institute of Technology, Konrad Lorenz Strasse 24, 3430 Tulln, Austria.
Johann Schinnerl4Chemodiversity Research Group, Department of Botany and Biodiversity Research, University of Vienna, Rennweg 14, 1030 Vienna, Austria.
Lothar Brecker5Department of Organic Chemistry, University of Vienna, Währinger Strasse 38, 1090 Vienna, Austria.
Stefan Böhmdorfer3Department of Chemistry, University of Natural Resources and Life Sciences (BOKU), Konrad-Lorenz-Straße 24, 3430 Tulln, Austria.
Monika Schmoll1Center for Health and Bioresources, AIT Austrian Institute of Technology, Konrad Lorenz Strasse 24, 3430 Tulln, Austria.ORCID 0000-0003-3918-0574
Austrian Institute of Technology · ATTU Wien · ATUniversity of Vienna · ATBOKU University · AT

Funding

Austrian Science Fund FWF P 24350Austrian Science Fund FWF P 26935
6 · The paper itself

Abstract

background

resultsHere, we investigated gene regulation by the catalytic subunit of protein kinase A (PKAc1) upon growth on cellulose. We found distinct gene sets for regulation upon growth in light and darkness with an overlap of only 13 genes. PKAc1 regulates metabolic genes as well as transport and defense functions. The overlap of gene regulation by PKAc1 with the genes representing the cAMP dependent regulatory output of the photoreceptor ENV1 indicates an involvement of PKA in this pathway, which counteracts its effects by contrasting regulation. Moreover, we found considerable overlap with the gene sets regulated under cellulase inducing conditions and by the carbon catabolite repressor CRE1. Our analysis also showed that PKAc1 regulates the genes of the SOR cluster associated with the biosynthesis of sorbicillinoids. The homologue of

conclusionsWe conclude that PKAc1 is involved in light dependent regulation of plant cell wall degradation, including carbon catabolite repression as well as secondary metabolism and development in

Indexed as

cAMP pathwayCellulaseHypocrea jecorinaSecondary metabolismSexual developmentTrichoderma reeseiTrichodimerol

Identifiers

PMID31528353
PMCPMC6734591
OpenAlexW2972765530

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.