Evidence map›Paper›PMID 31527888›Full record

ArticlePloS one2019

Sputum microbiota and inflammation at stable state and during exacerbations in a cohort of chronic obstructive pulmonary disease (COPD) patients.

Solveig Tangedal, Rune Nielsen, Marianne Aanerud, Louise J Persson, Harald G Wiker, Per S Bakke, Pieter S Hiemstra, Tomas M Eagan

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 2 pooled it
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 2 syntheses or guidelines pooled it, 35 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Review
  4. Bronchial and Systemic Relationships ofInternational journal of molecular sciences · 2026
    Article
  5. Article
  6. Review
  7. Article
  8. Review
  9. Review
  10. Article
  11. Observational
  12. Review
  13. Article
  14. Article
  15. Review
  16. Review
  17. Article
  18. Review
  19. Article
  20. Glucose Homeostasis in Relation to Neutrophil Mobilization in Smokers with COPD.International journal of chronic obstructive pulmonary disease · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Solveig TangedalDept. of Clinical Science, Faculty of Medicine, University of Bergen, Bergen, Norway.ORCID 0000-0001-8060-5306
Rune NielsenDept. of Clinical Science, Faculty of Medicine, University of Bergen, Bergen, Norway.
Marianne AanerudDept. of Thoracic Medicine, Haukeland University Hospital, Bergen, Norway.
Louise J PerssonDept. of Thoracic Medicine, Haukeland University Hospital, Bergen, Norway.
Harald G WikerDept. of Clinical Science, Faculty of Medicine, University of Bergen, Bergen, Norway.
Per S BakkeDept. of Clinical Science, Faculty of Medicine, University of Bergen, Bergen, Norway.
Pieter S HiemstraDept of Pulmonology, Leiden University Medical Center, Leiden, The Netherlands.
Tomas M EaganDept. of Clinical Science, Faculty of Medicine, University of Bergen, Bergen, Norway.
Haukeland University Hospital · NOLeiden University Medical Center · NLUniversity of Bergen · NO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundExacerbations of chronic obstructive pulmonary disease (COPD) are debilitating events and spur disease progression. Infectious causes are frequent; however, it is unknown to what extent exacerbations are caused by larger shifts in the airways' microbiota. The aim of the current study was to analyse the changes in microbial composition between stable state and during exacerbations, and the corresponding immune response.

methodsThe study sample included 36 COPD patients examined at stable state and exacerbation from the Bergen COPD Cohort and Exacerbations studies, and one patient who delivered sputum on 13 different occasions during the three-year study period. A physician examined the patients at all time points, and sputum induction was performed by stringent protocol. Only induced sputum samples were used in the current study, not spontaneously expectorated sputum. Sputum inflammatory markers (IL-6, IL-8, IL-18, IP-10, MIG, TNF-α) and antimicrobial peptides (AMPs, i.e. LL-37/hCAP-18, SLPI) were measured in supernatants, whereas target gene sequencing (16S rRNA) was performed on corresponding cell pellets. The microbiome bioinformatics platform QIIME2TM and the statistics environment R were applied for bioinformatics analyses.

resultsLevels of IP-10, MIG, TNF-α and AMPs were significantly different between the two disease states. Of 36 sample pairs, 24 had significant differences in the 12 most abundant genera between disease states. The diversity was significantly different in several individuals, but not when data was analysed on a group level. The one patient case study showed longitudinal dynamics in microbiota unrelated to disease state.

conclusionChanges in the sputum microbiota with changing COPD disease states are common, and are accompanied by changes in inflammatory markers. However, the changes are highly individual and heterogeneous events.

Indexed as

AdultAgedAntimicrobial Cationic PeptidesBiomarkersCohort StudiesCytokinesDisease ProgressionFemaleHumansInflammationMaleMicrobiotaMiddle AgedPulmonary Disease, Chronic ObstructiveRespiratory SystemRNA, Ribosomal, 16SAntimicrobial Cationic PeptidesBiomarkersCytokinesRNA, Ribosomal, 16S

Identifiers

PMID31527888
PMCPMC6748569
OpenAlexW2973526025

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.