Evidence map›Paper›PMID 31527639›Full record

ArticleScientific reports2019

FGF5 methylation is a sensitivity marker of esophageal squamous cell carcinoma to definitive chemoradiotherapy.

Jun Iwabu, Satoshi Yamashita, Hideyuki Takeshima, Takayoshi Kishino, Takamasa Takahashi, Ichiro Oda, Kazuo Koyanagi, Hiroyasu Igaki, Yuji Tachimori, Hiroyuki Daiko and 5 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 30 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Low-Level Viremia Impairs Efficacy of Immune Checkpoint Inhibitors in Unresectable Hepatocellular Carcinoma.Liver international : official journal of the International Association for the Study of the Liver · 2025
    Article
  5. Review
  6. Article
  7. Review
  8. Potential roles of FGF5 as a candidate therapeutic target in prostate cancer.American journal of clinical and experimental urology · 2023
    Review
  9. Article
  10. Review
  11. Article
  12. Prediction of tissue origin of adenocarcinomas in the esophagogastric junction by DNA methylation.Gastric cancer : official journal of the International Gastric Cancer Association and the Japanese Gastric Cancer Association · 2022
    Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 3 countries.

Jun IwabuDivision of Epigenomics, National Cancer Center Research Institute, Tokyo, Japan.
Satoshi YamashitaDivision of Epigenomics, National Cancer Center Research Institute, Tokyo, Japan.
Hideyuki TakeshimaDivision of Epigenomics, National Cancer Center Research Institute, Tokyo, Japan.
Takayoshi KishinoDivision of Epigenomics, National Cancer Center Research Institute, Tokyo, Japan.
Takamasa TakahashiDivision of Epigenomics, National Cancer Center Research Institute, Tokyo, Japan.
Ichiro OdaDivision of Endoscopy, National Cancer Center Hospital, Tokyo, Japan.
Kazuo KoyanagiDivision of Esophageal Surgery, National Cancer Center Hospital, Tokyo, Japan.
Hiroyasu IgakiDivision of Esophageal Surgery, National Cancer Center Hospital, Tokyo, Japan.
Yuji TachimoriDivision of Esophageal Surgery, National Cancer Center Hospital, Tokyo, Japan.ORCID http://orcid.org/0000-0003-1171-8141
Hiroyuki DaikoDivision of Esophageal Surgery, National Cancer Center Hospital, Tokyo, Japan.
Hidetsugu NakazatoDivision of Epigenomics, National Cancer Center Research Institute, Tokyo, Japan.
Kazuhiro NishiyamaDivision of Epigenomics, National Cancer Center Research Institute, Tokyo, Japan.
Yi-Chia LeeDepartment of Internal Medicine, College of Medicine, National Taiwan University, Taipei, Taiwan.
Kazuhiro HanazakiDepartment of Surgery, Kochi Medical School, Kochi, Japan.
Toshikazu UshijimaDivision of Epigenomics, National Cancer Center Research Institute, Tokyo, Japan. tushijim@ncc.go.jp.ORCID http://orcid.org/0000-0003-3405-7817
Kochi Medical School Hospital · JPEpigenomics (Germany) · DENational Cancer Center Hospital East · JPNational Taiwan University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Definitive chemoradiotherapy (dCRT) is the major treatment for esophageal squamous cell carcinoma (ESCC), and prediction of the response to dCRT is important so as not to miss an opportunity to cure an ESCC. Nevertheless, few validated markers are available. Here, we aimed to identify a highly reproducible marker using multi-layer omics analysis. 117 ESCC samples from 67 responders and 50 non-responders were divided into screening, validation, and re-validation sets. In the screening cohort (n = 41), somatic mutations in 114 genes showed no association with dCRT response. Genome-wide DNA methylation analysis using Infinium HumanMethylation450 BeadChip array identified four genic regions significantly associated with dCRT response. Among them, FGF5 methylation was validated to be associated with dCRT response (n = 34; P = 0.001), and further re-validated (n = 42; P = 0.020) by bisulfite-pyrosequencing. The sensitivity and specificity in the combined validation and re-validation sets (n = 76) were 45% and 90%, respectively, by using the cut-off value established in the screening set, and FGF5 methylation had predictive power independent from clinicopathological parameters. In ESCC cell lines, FGF5 promoter methylation repressed its expression. FGF5 expression was induced by cisplatin (CDDP) treatment in three unmethylated cell lines, but not in two methylated cell lines. Exogenous FGF5 overexpression in a cell line with its methylation conferred resistance to CDDP. In non-cancerous esophageal tissues, FGF5 was not expressed, and its methylation was present in a small fraction of cells. These results showed that FGF5 methylation is a validated marker for ESCC sensitivity to dCRT.

Indexed as

Biomarkers, TumorCell Line, TumorChemoradiotherapyDNA MethylationDrug Resistance, NeoplasmEsophageal MucosaEsophageal NeoplasmsEsophageal Squamous Cell CarcinomaFemaleFibroblast Growth Factor 5HumansMaleMiddle AgedPromoter Regions, GeneticRadiation ToleranceTreatment OutcomeBiomarkers, TumorFGF5 protein, humanFibroblast Growth Factor 5

Identifiers

PMID31527639
PMCPMC6746740
OpenAlexW2972756279

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.