Evidence map›Paper›PMID 31527052›Full record

ArticleJournal of cell science2019

TGFβ-induced fibroblast activation requires persistent and targeted HDAC-mediated gene repression.

Dakota L Jones, Andrew J Haak, Nunzia Caporarello, Kyoung M Choi, Zhenqing Ye, Huihuang Yan, Xaralabos Varelas, Tamas Ordog, Giovanni Ligresti, Daniel J Tschumperlin

Open access · bronzeAbstract read
In one paragraph

Article in Journal of cell science, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed, 1 pooled it
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 1 synthesis or guideline pooled it, 70 citations in OpenAlex.

  1. Pooled it
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  12. Article
  13. Mechanisms and Therapeutic Potential of Myofibroblast Transformation in Pulmonary Fibrosis.Journal of respiratory biology and translational medicine · 2025
    Article
  14. Evidence for a lipofibroblast-to-The European respiratory journal · 2025
    Article
  15. Review
  16. Role of epigenetics in corneal health and disease.Progress in retinal and eye research · 2025
    Review
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Dakota L JonesDepartment of Physiology & Biomedical Engineering, Mayo Clinic, Rochester, MN 55905, USA.
Andrew J HaakDepartment of Physiology & Biomedical Engineering, Mayo Clinic, Rochester, MN 55905, USA.
Nunzia CaporarelloDepartment of Physiology & Biomedical Engineering, Mayo Clinic, Rochester, MN 55905, USA.
Kyoung M ChoiDepartment of Physiology & Biomedical Engineering, Mayo Clinic, Rochester, MN 55905, USA.
Zhenqing YeDepartment of Health Sciences Research, Mayo Clinic, Rochester, MN 55905, USA.
Huihuang YanDepartment of Health Sciences Research, Mayo Clinic, Rochester, MN 55905, USA.
Xaralabos VarelasDepartment of Biochemistry, Boston University, Boston, MA 02118, USA.
Tamas OrdogDepartment of Physiology & Biomedical Engineering, Mayo Clinic, Rochester, MN 55905, USA.
Giovanni LigrestiDepartment of Physiology & Biomedical Engineering, Mayo Clinic, Rochester, MN 55905, USA.
Daniel J TschumperlinDepartment of Physiology & Biomedical Engineering, Mayo Clinic, Rochester, MN 55905, USA tschumperlin.daniel@mayo.edu.ORCID 0000-0002-5115-9025
Mayo Clinic · USMayo Clinic in Florida · USBoston University · US

Funding

Mechanobiology of Lung FibrosisR01HL092961 · NHLBI · MAYO CLINIC ROCHESTER · PI Daniel J. Tschumperlin · 2009 to 2026
$8.0M
Interdisciplinary Training in Lung Physiology and Biomedical EngineeringT32HL105355 · NHLBI · MAYO CLINIC ROCHESTER · PI PRAKASH, Y. S., SIECK, GARY C. · 2012 to 2021
$3.9M
Epigenetic regulation of pulmonary fibrosisR01HL142596 · NHLBI · MAYO CLINIC ROCHESTER · PI Giovanni Ligresti · 2018 to 2026
$2.9M
Targeting matrix stiffness in lung and liver fibrosisR01HL133320 · NHLBI · MAYO CLINIC ROCHESTER · PI SHAH, VIJAY H., TSCHUMPERLIN, DANIEL J. · 2016 to 2019
$2.2M
NHLBI NIH HHS R01 HL092961NHLBI NIH HHS R01 HL133320NHLBI NIH HHS R01 HL142596NHLBI NIH HHS T32 HL105355
6 · The paper itself

Abstract

Tissue fibrosis is a chronic disease driven by persistent fibroblast activation that has recently been linked to epigenetic modifications. Here, we screened a small library of epigenetic small-molecule modulators to identify compounds capable of inhibiting or reversing TGFβ-mediated fibroblast activation. We identified pracinostat, an HDAC inhibitor, as a potent attenuator of lung fibroblast activation and confirmed its efficacy in patient-derived fibroblasts isolated from fibrotic lung tissue. Mechanistically, we found that HDAC-dependent transcriptional repression was an early and essential event in TGFβ-mediated fibroblast activation. Treatment of lung fibroblasts with pracinostat broadly attenuated TGFβ-mediated epigenetic repression and promoted fibroblast quiescence. We confirmed a specific role for HDAC-dependent histone deacetylation in the promoter region of the anti-fibrotic gene

Indexed as

Cell LineDown-RegulationFibroblastsHistone DeacetylasesHumansLungPeroxisome Proliferator-Activated Receptor Gamma Coactivator 1-alphaPromoter Regions, GeneticPulmonary FibrosisTransforming Growth Factor betaHDAC7 protein, humanHistone DeacetylasesPeroxisome Proliferator-Activated Receptor Gamma Coactivator 1-alphaPPARGC1A protein, humanTransforming Growth Factor betaChromatinEpigeneticsFibrosisMyofibroblasts

Identifiers

PMID31527052
PMCPMC6826010
OpenAlexW2974610252

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.