Evidence map›Paper›PMID 31526615›Full record

ReviewTrends in genetics : TIG2019

Baker's Yeast Clinical Isolates Provide a Model for How Pathogenic Yeasts Adapt to Stress.

Vandana Raghavan, Charles F Aquadro, Eric Alani

Abstract readReview
In one paragraph

Review in Trends in genetics : TIG, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Yeast adapts to diverse ecological niches driven by genomics and metabolic reprogramming.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  2. Ppn2 Polyphosphatase Improves the Ability ofJournal of fungi (Basel, Switzerland) · 2024
    Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. SUMO and cellular adaptive mechanisms.Experimental & molecular medicine · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Vandana RaghavanDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, NY, USA.
Charles F AquadroDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, NY, USA.
Eric AlaniDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, NY, USA. Electronic address: eea3@cornell.edu.

Funding

Roles for Mismatch Repair Proteins in Maintaining Genome StabilityR01GM053085 · NIGMS · CORNELL UNIVERSITY ITHACA · PI ALANI, ERIC E. · 1995 to 2019
$7.3M
Adaptive Protein Evolution of the Drosophila Germline Stem Cell Gene Bag of MarblesR01GM095793 · NIGMS · CORNELL UNIVERSITY · PI AQUADRO, CHARLES F · 2011 to 2024
$3.9M
Roles for Mismatch Repair Proteins in Maintaining Genome StabilityR35GM134872 · NIGMS · CORNELL UNIVERSITY · PI Eric E. Alani · 2020 to 2026
$2.8M
NIGMS NIH HHS R01 GM053085NIGMS NIH HHS R01 GM095793NIGMS NIH HHS R35 GM134872
6 · The paper itself

Abstract

Global outbreaks of drug-resistant fungi such as Candida auris are thought to be due at least in part to excessive use of antifungal drugs. Baker's yeast Saccharomyces cerevisiae has gained importance as an emerging opportunistic fungal pathogen that can cause infections in immunocompromised patients. Analyses of over 1000 S. cerevisiae isolates are providing rich resources to better understand how fungi can grow in human environments. A large percentage of clinical S. cerevisiae isolates are heterozygous across many nucleotide sites, and a significant proportion are of mixed ancestry and/or are aneuploid or polyploid. Such features potentially facilitate adaptation to new environments. These observations provide strong impetus for expanding genomic and molecular studies on clinical and wild isolates to understand the prevalence of genetic diversity and instability-generating mechanisms, and how they are selected for and maintained. Such work can also lead to the identification of new targets for antifungal drugs.

Indexed as

Stress, PhysiologicalAdaptation, BiologicalCandidiasisDisease SusceptibilityGenetic VariationHost-Pathogen InteractionsHumansMutationOpportunistic InfectionsPhenotypePloidiesSaccharomyces cerevisiaeVirulenceadaptation to stressbaker's yeastclinical isolatesgenome instabilitySaccharomyces cerevisiae

Identifiers

PMID31526615
PMCPMC6825890

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.