Evidence map›Paper›PMID 31525194›Full record

ArticlePLoS genetics2019

Temperature preference can bias parental genome retention during hybrid evolution.

Caiti S Smukowski Heil, Christopher R L Large, Kira Patterson, Angela Shang-Mei Hickey, Chiann-Ling C Yeh, Maitreya J Dunham

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
4.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 35 citations in OpenAlex.

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  6. Experimental Evolution in a Warming World: The Omics Era.Molecular biology and evolution · 2024
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  10. Loss of Heterozygosity and Its Importance in Evolution.Journal of molecular evolution · 2023
    Review
  11. Achiasmatic meiosis in the unisexual Amazon molly, Poecilia formosa.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2022
    Article
  12. Genomic Adaptations ofMicroorganisms · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Caiti S Smukowski HeilGenome Sciences Department, University of Washington, Seattle, Washington, United States of America.ORCID 0000-0002-2864-1315
Christopher R L LargeGenome Sciences Department, University of Washington, Seattle, Washington, United States of America.ORCID 0000-0002-5732-970X
Kira PattersonGenome Sciences Department, University of Washington, Seattle, Washington, United States of America.ORCID 0000-0001-8531-4962
Angela Shang-Mei HickeyGenome Sciences Department, University of Washington, Seattle, Washington, United States of America.ORCID 0000-0003-4407-6894
Chiann-Ling C YehGenome Sciences Department, University of Washington, Seattle, Washington, United States of America.ORCID 0000-0003-4032-8871
Maitreya J DunhamGenome Sciences Department, University of Washington, Seattle, Washington, United States of America.ORCID 0000-0001-9944-2666
University of Washington · US

Funding

Howard Hughes Medical Institute
6 · The paper itself

Abstract

Interspecific hybridization can introduce genetic variation that aids in adaptation to new or changing environments. Here, we investigate how hybrid adaptation to temperature and nutrient limitation may alter parental genome representation over time. We evolved Saccharomyces cerevisiae x Saccharomyces uvarum hybrids in nutrient-limited continuous culture at 15°C for 200 generations. In comparison to previous evolution experiments at 30°C, we identified a number of responses only observed in the colder temperature regime, including the loss of the S. cerevisiae allele in favor of the cryotolerant S. uvarum allele for several portions of the hybrid genome. In particular, we discovered a genotype by environment interaction in the form of a loss of heterozygosity event on chromosome XIII; which species' haplotype is lost or maintained is dependent on the parental species' temperature preference and the temperature at which the hybrid was evolved. We show that a large contribution to this directionality is due to a temperature dependent fitness benefit at a single locus, the high affinity phosphate transporter gene PHO84. This work helps shape our understanding of what forces impact genome evolution after hybridization, and how environmental conditions may promote or disfavor the persistence of hybrids over time.

Indexed as

Adaptation, BiologicalAdaptation, PhysiologicalBiological EvolutionChimeraCold TemperatureGenetic FitnessGenetic VariationGenome, FungalGenotypeHybridization, GeneticProton-Phosphate SymportersSaccharomycesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTemperaturePHO84 protein, S cerevisiaeProton-Phosphate SymportersSaccharomyces cerevisiae Proteins

Identifiers

PMID31525194
PMCPMC6762194
OpenAlexW2974598545

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.