Evidence map›Paper›PMID 31524146›Full record

ArticleCancer biomarkers : section A of Disease markers2019

A chemokine/chemokine receptor signature potentially predicts clinical outcome in colorectal cancer patients.

Andrew Mitchell, Sarrah L Hasanali, Daley S Morera, Rohitha Baskar, Xin Wang, Rahil Khan, Asif Talukder, Charles S Li, Meenakkshy Manoharan, Andre R Jordan and 6 more

Open access · greenAbstract read
In one paragraph

Article in Cancer biomarkers : section A of Disease markers, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.9field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 43 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 1 country.

Andrew MitchellDepartment of Surgery, Medical College of Georgia, Augusta University, Augusta, GA, USA.
Sarrah L HasanaliBiochemistry and Molecular Biology, Medical College of Georgia, Augusta University, Augusta, GA, USA.
Daley S MoreraBiochemistry and Molecular Biology, Medical College of Georgia, Augusta University, Augusta, GA, USA.
Rohitha BaskarBiochemistry and Molecular Biology, Medical College of Georgia, Augusta University, Augusta, GA, USA.
Xin WangBiochemistry and Molecular Biology, Medical College of Georgia, Augusta University, Augusta, GA, USA.
Rahil KhanBio-Repository Alliance of Georgia for Oncology at Georgia Cancer Center, Medical College of Georgia, Augusta University, Augusta, GA, USA.
Asif TalukderDepartment of Surgery, Medical College of Georgia, Augusta University, Augusta, GA, USA.
Charles S LiBiochemistry and Molecular Biology, Medical College of Georgia, Augusta University, Augusta, GA, USA.
Meenakkshy ManoharanWashington University at St Louis, St Louis, MO, USA.
Andre R JordanBiochemistry and Molecular Biology, Medical College of Georgia, Augusta University, Augusta, GA, USA.
Jiaojiao WangBiochemistry and Molecular Biology, Medical College of Georgia, Augusta University, Augusta, GA, USA.
Roni J BollagBio-Repository Alliance of Georgia for Oncology at Georgia Cancer Center, Medical College of Georgia, Augusta University, Augusta, GA, USA.
Nagendra SinghBiochemistry and Molecular Biology, Medical College of Georgia, Augusta University, Augusta, GA, USA.
Daniel AlboDepartment of Surgery, Medical College of Georgia, Augusta University, Augusta, GA, USA.
Santu GhoshDepartment of Population Health Sciences, Medical College of Georgia, Augusta University, Augusta, GA, USA.
Vinata B LokeshwarBiochemistry and Molecular Biology, Medical College of Georgia, Augusta University, Augusta, GA, USA.
Augusta University · USAugusta University Health · USUniversity of Miami · USWashington University in St. Louis · US

Funding

Novel Biomarkers for the Clinical Management of Bladder CancerR01CA227277 · NCI · AUGUSTA UNIVERSITY · PI LOKESHWAR, VINATA B · 2018 to 2023
$2.2M
The role of a new molecular driver in bladder cancerF31CA236437 · NCI · AUGUSTA UNIVERSITY · PI MORERA, DALEY · 2019 to 2020
$73k
NCI NIH HHS F31 CA236437NCI NIH HHS R01 CA227277
6 · The paper itself

Abstract

backgroundDifferential expression of chemokines/chemokine receptors in colorectal cancer (CRC) may enable molecular characterization of patients' tumors for predicting clinical outcome.

objectiveTo evaluate the prognostic ability of these molecules in a CRC cohort and the CRC TCGA-dataset.

methodsChemokine (CXCL-12α, CXCL-12β, IL-17A, CXCL-8, GM-CSF) and chemokine receptor (CXCR-4, CXCR-7) transcripts were analyzed by RT-qPCR in 76 CRC specimens (normal: 27, tumor: 49; clinical cohort). RNA-Seq data was analyzed from the TCGA-dataset (n= 375). Transcript levels were correlated with outcome; analyses: univariate, multivariable, Kaplan-Meier.

resultsIn the clinical cohort, chemokine/chemokine receptor levels were elevated 3-10-fold in CRC specimens (P⩽ 0.004) and were higher in patients who developed metastasis (P= 0.03 - < 0.0001). CXCR-4, CXCR-7, CXCL-12α, CXCL-8, IL-17 and GM-CSF levels predicted metastasis (P⩽ 0.0421) and/or overall survival (OS; P⩽ 0.0373). The CXCR-4+CXCR-7+CXCL-12 marker (CXCR-4/7+CXCL-12 (α/b) signature) stratified patients into risk for metastasis (P= 0.0014; OR, 2.72) and OS (P= 0.0442; OR, 2.7); sensitivity: 86.67%, specificity: 97.06%. In the TCGA-dataset, the CXCR-4/7+CXCL-12 signature predicted metastasis (P= 0.011; OR, 2.72) and OS (P= 0.0006; OR: 4.04). In both datasets, the signature was an independent predictor of clinical outcome.

conclusionsResults of 451 specimens from both cohorts reveal that the CXCR-4/7+CXCL-12 signature potentially predicts outcome in CRC patients and may allow earlier intervention.

Indexed as

AgedBiomarkers, TumorChemokine CXCL12ColonColorectal NeoplasmsDatasets as TopicFemaleFollow-Up StudiesHumansKaplan-Meier EstimateMaleMiddle AgedPrognosisReal-Time Polymerase Chain ReactionReceptors, CXCRReceptors, CXCR4ACKR3 protein, humanBiomarkers, TumorChemokine CXCL12CXCL12 protein, humanCXCR4 protein, humanReceptors, CXCRReceptors, CXCR4colorectal cancerCXCL-12CXCL-8CXCR-4CXCR-7

Identifiers

PMID31524146
PMCPMC8299666
OpenAlexW2972767688

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.