Evidence map›Paper›PMID 31523056›Full record

ArticleBritish journal of cancer2019

Prognosis and modulation mechanisms of COMMD6 in human tumours based on expression profiling and comprehensive bioinformatics analysis.

Mi Yang, Weiqiang Huang, Yaling Sun, Huazhen Liang, Min Chen, Xixi Wu, Xiaoqing Wang, Longshan Zhang, Xiaoya Cheng, Yao Fan and 3 more

Open access · hybridAbstract read
In one paragraph

Article in British journal of cancer, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
4.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 68 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Mi YangDepartment of Radiation Oncology, Nanfang Hospital, Southern Medical University, Guangdong, Guangzhou, China.
Weiqiang HuangDepartment of Radiation Oncology, Nanfang Hospital, Southern Medical University, Guangdong, Guangzhou, China.
Yaling SunDepartment of Radiation Oncology, The Third Affiliated Hospital, Sun Yat-sen University, Guangdong, Guangzhou, China.
Huazhen LiangDepartment of Radiation Oncology, Nanfang Hospital, Southern Medical University, Guangdong, Guangzhou, China.
Min ChenDepartment of Radiation Oncology, Nanfang Hospital, Southern Medical University, Guangdong, Guangzhou, China.
Xixi WuDepartment of Radiation Oncology, Nanfang Hospital, Southern Medical University, Guangdong, Guangzhou, China.
Xiaoqing WangDepartment of Radiation Oncology, Nanfang Hospital, Southern Medical University, Guangdong, Guangzhou, China.
Longshan ZhangDepartment of Radiation Oncology, Nanfang Hospital, Southern Medical University, Guangdong, Guangzhou, China.
Xiaoya ChengDepartment of Radiation Oncology, Nanfang Hospital, Southern Medical University, Guangdong, Guangzhou, China.
Yao FanDepartment of Radiation Oncology, Nanfang Hospital, Southern Medical University, Guangdong, Guangzhou, China.
Hua PanDepartment of Radiation Oncology, Nanfang Hospital, Southern Medical University, Guangdong, Guangzhou, China.
Longhua ChenDepartment of Radiation Oncology, Nanfang Hospital, Southern Medical University, Guangdong, Guangzhou, China. chenlh5461@163.com.
Jian GuanDepartment of Radiation Oncology, Nanfang Hospital, Southern Medical University, Guangdong, Guangzhou, China. guanjian5461@163.com.
Nanfang Hospital · CNSouthern Medical University · CNSun Yat-sen University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe Copper Metabolism MURR1 (COMM) domain family has been reported to play important roles in tumorigenesis. As a prototype for the COMMD family, the expression pattern and biological function of COMMD6 in human tumours remain unknown.

methodsCOMMD6 expression in BALB/c mice and human tissues was examined using real-time PCR and immunohistochemistry. Kaplan-Meier analysis was applied to evaluate the prognosis of COMMD6 in tumours. Competing endogenous RNA (ceRNA) and transcriptional regulation network were constructed based on differentially expressed mRNAs, microRNAs and long non-coding RNAs from the cancer genome atlas database. GO and KEGG enrichment analysis were used to explore the bioinformatics implication.

resultsCOMMD6 expression was widely observed in BALB/c mice and human tissues, which predicted prognosis of cancer patients. Furthermore, we shed light on the underlying tumour promoting role and mechanism of COMMD6 by constructing a TEX41-miR-340-COMMD6 ceRNA network in head and neck squamous cell carcinoma and miR-218-CDX1-COMMD6 transcriptional network in cholangiocarcinoma. In addition, COMMD6 may modulate the ubiquitination and degradation of NF-κB subunits and regulate ribonucleoprotein and spliceosome complex biogenesis in tumours.

conclusionsThis study may help to elucidate the functions and mechanisms of COMMD6 in human tumours, providing a potential biomarker for tumour prevention and therapy.

Indexed as

Adaptor Proteins, Signal TransducingAnimalsBile Duct NeoplasmsBreastCell Line, TumorCholangiocarcinomaDNA Copy Number VariationsDNA MethylationFemaleGastrointestinal TractGene Expression ProfilingGene Regulatory NetworksHead and Neck NeoplasmsHomeodomain ProteinsHumansImmunohistochemistryAdaptor Proteins, Signal TransducingCDX1 protein, humanCOMMD6 protein, humanCommd6 protein, mouseHomeodomain ProteinsMicroRNAsMIRN218 microRNA, humanMIRN340 microRNA, humanNF-kappa BRibonucleoproteinsRNA, Long NoncodingRNA, Messenger

Identifiers

PMID31523056
PMCPMC6889128
OpenAlexW2972441385

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.