Evidence map›Paper›PMID 31522486›Full record

ArticleJournal of biomedical optics2019

Structured light imaging for breast-conserving surgery, part II: texture analysis and classification.

Samuel S Streeter, Benjamin W Maloney, David M McClatchy, Michael Jermyn, Brian W Pogue, Elizabeth J Rizzo, Wendy A Wells, Keith D Paulsen

Abstract read
In one paragraph

Article in Journal of biomedical optics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Samuel S StreeterThayer School of Engineering at Dartmouth, Optics in Medicine, Hanover, New Hampshire, United States.
Benjamin W MaloneyThayer School of Engineering at Dartmouth, Optics in Medicine, Hanover, New Hampshire, United States.
David M McClatchyThayer School of Engineering at Dartmouth, Optics in Medicine, Hanover, New Hampshire, United States.
Michael JermynThayer School of Engineering at Dartmouth, Optics in Medicine, Hanover, New Hampshire, United States.
Brian W PogueThayer School of Engineering at Dartmouth, Optics in Medicine, Hanover, New Hampshire, United States.
Elizabeth J RizzoGeisel School of Medicine at Dartmouth, Department of Pathology, Hanover, New Hampshire, United States.
Wendy A WellsGeisel School of Medicine at Dartmouth, Department of Pathology, Hanover, New Hampshire, United States.
Keith D PaulsenThayer School of Engineering at Dartmouth, Optics in Medicine, Hanover, New Hampshire, United States.

Funding

Optical Scatter Imaging System for Surgical Specimen Margin Assessment during Breast Conserving SurgeryR01CA192803 · NCI · DARTMOUTH COLLEGE · PI PAULSEN, KEITH D., POGUE, BRIAN WILLIAM · 2015 to 2019
$2.7M
Structured Light Scatteroscopy for Intraoperative Breast Tumor Margin AssessmentF31CA196308 · NCI · DARTMOUTH COLLEGE · PI MCCLATCHY III, DAVID · 2016 to 2018
$94k
NCI NIH HHS F31 CA196308NCI NIH HHS R01 CA192803
6 · The paper itself

Abstract

Subdiffuse spatial frequency domain imaging (sd-SFDI) data of 42 freshly excised, bread-loafed tumor resections from breast-conserving surgery (BCS) were evaluated using texture analysis and a machine learning framework for tissue classification. Resections contained 56 regions of interest (RoIs) determined by expert histopathological analysis. RoIs were coregistered with sd-SFDI data and sampled into ∼4  ×  4  mm2 subimage samples of confirmed and homogeneous histological categories. Sd-SFDI reflectance textures were analyzed using gray-level co-occurrence matrix pixel statistics, image primitives, and power spectral density curve parameters. Texture metrics exhibited statistical significance (p-value  <  0.05) between three benign and three malignant tissue subtypes. Pairs of benign and malignant subtypes underwent texture-based, binary classification with correlation-based feature selection. Classification performance was evaluated using fivefold cross-validation and feature grid searching. Classification using subdiffuse, monochromatic reflectance (illumination spatial frequency of fx  =  1.37  mm  −  1, optical wavelength of λ  =  490  nm) achieved accuracies ranging from 0.55 (95% CI: 0.41 to 0.69) to 0.95 (95% CI: 0.90 to 1.00) depending on the benign–malignant diagnosis pair. Texture analysis of sd-SFDI data maintains the spatial context within images, is free of light transport model assumptions, and may provide an alternative, computationally efficient approach for wide field-of-view (cm2) BCS tumor margin assessment relative to pixel-based optical scatter or color properties alone.

Indexed as

BreastBreast NeoplasmsFemaleHumansImage Processing, Computer-AssistedMachine LearningMastectomy, SegmentalSurgery, Computer-Assistedbreast-conserving surgeryclassificationmachine learningspatial frequency domain imagingstructured lighttexture analysis

Identifiers

PMID31522486
PMCPMC6744928

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.