Evidence map›Paper›PMID 31516863›Full record

ArticleJournal of biological research (Thessalonike, Greece)2019

Genetic diversity analysis in

Medhin Gebrehiwet, Teklehaimanot Haileselassie, Fekadu Gadissa, Kassahun Tesfaye

Abstract read
In one paragraph

Article in Journal of biological research (Thessalonike, Greece), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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0cells of the map it votes in
2citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

4 authors.

Medhin Gebrehiwet1Department of Biotechnology, Aksum University, P.O. Box 1010, Aksum, Tigray Ethiopia.
Teklehaimanot Haileselassie2Institute of Biotechnology, Addis Ababa University, P. O. Box 1176, Addis Ababa, Ethiopia.
Fekadu GadissaBiology Department, Madda Walabu University, P. O. Box 247, Bale Robe, Ethiopia.
Kassahun Tesfaye2Institute of Biotechnology, Addis Ababa University, P. O. Box 1176, Addis Ababa, Ethiopia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

background

resultsIn the present study, ten polymorphic ISSR markers were screened and optimized, that generated an average of 7.4 scorable bands per marker and revealed high overall percent polymorphism (95%), Nei's gene diversity (h = 0.40) and Shannon index (I = 0.62) suggesting ISSR's effectiveness in detecting high levels of genetic diversity. A considerably high overall populations gene diversity (Nei's) (h = 0.32) and Shannon index (I = 0.47) were observed, revealing high potential of the populations for further breeding and conservation efforts particularly for population from Gurage administrative zone, which showed the highest values. Similarly, estimation of pairwise genetic distance revealed the importance of cross breeding population from Awi administrative zone to the rest populations. Analysis of hierarchical molecular variance (AMOVA) showed higher levels of genetic differentiation within populations (92%), and collection regions (94%) suggesting that either clonal mode of propagation in the crop or farmers selection pressure for important agronomic traits or both maintained the original heterozygosity in the crop. UPGMA phylogenetic analysis did not strictly group the populations based on their geographic region of origin, which could be attributed to the widely practiced tuber exchange and hence continuous human mediated exchange of genetic material and sharing of the same genetic base among the geographic regions.

conclusionsThe ISSR markers used in the present study were effective in revealing extent and patterns of genetic diversity in

Indexed as

Ethiopian potatoGenetic diversityISSRMolecular markerPlectranthus edulis

Identifiers

PMID31516863
PMCPMC6734312

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