Evidence map›Paper›PMID 31513650›Full record

ArticlePloS one2019

Lymphocyte proliferation induced by high-affinity peptides for HLA-B*51:01 in Behçet's uveitis.

Toshikatsu Kaburaki, Hisae Nakahara, Rie Tanaka, Kimiko Okinaga, Hidetoshi Kawashima, Youichiro Hamasaki, Thanyada Rungrotmongkol, Supot Hannongbua, Hiroshi Noguchi, Makoto Aihara and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Heat Shock Proteins in Behçet SyndromeBalkan medical journal · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Toshikatsu KaburakiDepartment of Ophthalmology, The University of Tokyo Graduate School of Medicine, Tokyo, Japan.ORCID 0000-0003-1132-6148
Hisae NakaharaDepartment of Ophthalmology, The University of Tokyo Graduate School of Medicine, Tokyo, Japan.
Rie TanakaDepartment of Ophthalmology, The University of Tokyo Graduate School of Medicine, Tokyo, Japan.
Kimiko OkinagaDepartment of Ophthalmology, The University of Tokyo Graduate School of Medicine, Tokyo, Japan.
Hidetoshi KawashimaDepartment of Ophthalmology, Jichi Medical University, Tochigi, Japan.
Youichiro HamasakiDepartment of Dermatology, Dokkyo Medical University, Tochigi, Japan.
Thanyada RungrotmongkolDepartment of Biochemistry, Faculty of Science, Chulalongkorn University, Bangkok, Thailand.
Supot HannongbuaComputational Chemistry Unit Cell, Department of Chemistry, Faculty of Science, Chulalongkorn University, Bangkok, Thailand.
Hiroshi NoguchiDepartment of Pharmacognosy, Nihon Pharmaceutical University, Saitama, Japan.
Makoto AiharaDepartment of Ophthalmology, The University of Tokyo Graduate School of Medicine, Tokyo, Japan.
Fujio TakeuchiDepartment of Pharmacology, University of Shizuoka, Shizuoka, Japan.
The University of Tokyo · JPChulalongkorn University · THUniversity of Shizuoka · JPDokkyo Medical University · JPJichi Medical University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Several proteins have been proposed as candidate auto-antigens in the pathogenesis of Behçet's disease (BD). In this study, we aimed to confirm the cellular responses to candidate peptide autoantigens with high affinity for the HLA-B*51:01 molecule using computerized binding predictions and molecular dynamics simulations. We identified two new candidate peptides (HSP65PD, derived from heat shock protein-65, and B51PD, derived from HLA-B*51:01) with high-affinity to the HLA-B*51:01 binding pocket using the Immune Epitope Database for Major Histocompatibility Complex-I Binding Prediction and molecular dynamics simulations. The peptide-induced proliferation of lymphocytes from patients with BD, sarcoidosis, Vogt-Koyanagi-Harada disease (VKH) with panuveitis, systemic scleroderma (SSc) without uveitis, and healthy controls (HC) was investigated using the bromodeoxyuridine assay. The proliferative response of leukocytes to HSP65PD was significantly higher in BD (SI 1.92 ± 0.65) than that in sarcoidosis (SI 1.38 ± 0.46), VKH (SI 1.40 ± 0.33), SSc (SI 1.32 ± 0.31), and HC (SI 1.27 ± 0.28) (P = 0.0004, P = 0.0007, P < 0.0001, P < 0.0001, respectively, Mann-Whitney's U-test). The proliferative response of leukocytes to B51PD was also higher in BD than that in sarcoidosis, VKH, SSc without uveitis, and HC, whereas no significant differences were observed among the five groups in response to a control peptide derived from topoisomerase 1. A significantly higher response to HPS65PD and B51PD was observed in the HLA-B*51:01-positive patients with BD than in the HLA-B*51:01-negative patients. In conclusion, two peptides that had high affinity to HLA-B*51:01 in computerized binding prediction showed significantly higher response in HLA-B*51:01-positive patients with BD, indicating the usefulness of computerized simulations for identifying autoreactive peptides to HLAs.

Indexed as

AdultAgedAged, 80 and overBehcet SyndromeCell ProliferationComputer SimulationFemaleHLA-B AntigensHumansLymphocyte ActivationLymphocytesMaleMiddle AgedMolecular Dynamics SimulationPeptidesUveitisHLA-B AntigensPeptides

Identifiers

PMID31513650
PMCPMC6742369
OpenAlexW2973169461

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.