Evidence map›Paper›PMID 31513570›Full record

ArticlePLoS computational biology2019

Characterizing and dissociating multiple time-varying modulatory computations influencing neuronal activity.

Kaiser Niknam, Amir Akbarian, Kelsey Clark, Yasin Zamani, Behrad Noudoost, Neda Nategh

Abstract read
In one paragraph

Article in PLoS computational biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. WIDESPREAD RECEPTIVE FIELD REMAPPING IN EARLY VISUAL CORTEX.bioRxiv : the preprint server for biology · 2024
    Article
  7. Review
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Kaiser NiknamDepartment of Electrical and Computer Engineering, University of Utah, Salt Lake City, Utah, United States of America.ORCID 0000-0003-0884-725X
Amir AkbarianDepartment of Electrical and Computer Engineering, University of Utah, Salt Lake City, Utah, United States of America.ORCID 0000-0002-3794-8853
Kelsey ClarkDepartment of Ophthalmology and Visual Sciences, University of Utah, Salt Lake City, Utah, United States of America.
Yasin ZamaniDepartment of Electrical and Computer Engineering, University of Utah, Salt Lake City, Utah, United States of America.ORCID 0000-0002-8793-4767
Behrad NoudoostDepartment of Ophthalmology and Visual Sciences, University of Utah, Salt Lake City, Utah, United States of America.ORCID 0000-0002-1588-027X
Neda NateghDepartment of Electrical and Computer Engineering, University of Utah, Salt Lake City, Utah, United States of America.ORCID 0000-0003-0521-692X

Funding

University of Utah, Core Vision Research GrantP30EY014800 · NEI · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI Bryan William Jones · 2005 to 2026
$14.6M
Understanding the prefrontal mechanisms involved in the enhancement and maintenance of visual signals.R01EY026924 · NEI · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI NOUDOOST, BEHRAD · 2016 to 2025
$3.5M
NEI NIH HHS P30 EY014800NEI NIH HHS R01 EY026924
6 · The paper itself

Abstract

In many brain areas, sensory responses are heavily modulated by factors including attentional state, context, reward history, motor preparation, learned associations, and other cognitive variables. Modelling the effect of these modulatory factors on sensory responses has proven challenging, mostly due to the time-varying and nonlinear nature of the underlying computations. Here we present a computational model capable of capturing and dissociating multiple time-varying modulatory effects on neuronal responses on the order of milliseconds. The model's performance is tested on extrastriate perisaccadic visual responses in nonhuman primates. Visual neurons respond to stimuli presented around the time of saccades differently than during fixation. These perisaccadic changes include sensitivity to the stimuli presented at locations outside the neuron's receptive field, which suggests a contribution of multiple sources to perisaccadic response generation. Current computational approaches cannot quantitatively characterize the contribution of each modulatory source in response generation, mainly due to the very short timescale on which the saccade takes place. In this study, we use a high spatiotemporal resolution experimental paradigm along with a novel extension of the generalized linear model framework (GLM), termed the sparse-variable GLM, to allow for time-varying model parameters representing the temporal evolution of the system with a resolution on the order of milliseconds. We used this model framework to precisely map the temporal evolution of the spatiotemporal receptive field of visual neurons in the middle temporal area during the execution of a saccade. Moreover, an extended model based on a factorization of the sparse-variable GLM allowed us to disassociate and quantify the contribution of individual sources to the perisaccadic response. Our results show that our novel framework can precisely capture the changes in sensitivity of neurons around the time of saccades, and provide a general framework to quantitatively track the role of multiple modulatory sources over time.

Indexed as

Models, NeurologicalAlgorithmsAnimalsComputational BiologyMacaca mulattaMaleNeuronsPhotic StimulationSaccades

Identifiers

PMID31513570
PMCPMC6759185

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.