Evidence map›Paper›PMID 31511848›Full record

ArticleNature metabolism2019

Glutamine independence is a selectable feature of pluripotent stem cells.

Santosha A Vardhana, Paige K Arnold, Bess P Rosen, Yanyang Chen, Bryce W Carey, Danwei Huangfu, Carlos Carmona Fontaine, Craig B Thompson, Lydia W S Finley

Abstract read
In one paragraph

Article in Nature metabolism, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
2.8field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 69 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Santosha A VardhanaCancer Biology and Genetics Program, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
Paige K ArnoldCenter for Epigenetics Research, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
Bess P RosenDevelopmental Biology Program, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
Yanyang ChenCenter for Epigenetics Research, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
Bryce W CareyLaboratory of Chromatin Biology and Epigenetics, The Rockefeller University, New York, New York, USA.
Danwei HuangfuDevelopmental Biology Program, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
Carlos Carmona FontaineCenter for Genomics & Systems Biology, Department of Biology, New York University, New York, New York, USA.
Craig B ThompsonCancer Biology and Genetics Program, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
Lydia W S FinleyCenter for Epigenetics Research, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
Memorial Sloan Kettering Cancer Center · USNew York University · USRockefeller University · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
TRAINING PROGRAM IN MOLECULAR AND CELLULAR BIOLOGYT32GM008539 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI BROWN, ANTHONY M.C. · 1995 to 2020
$5.0M
Understanding Pancreatic Progenitors for Diabetes Cell-Replacement TherapyR01DK096239 · NIDDK · SLOAN-KETTERING INST CAN RESEARCH · PI HUANGFU, DANWEI · 2012 to 2021
$4.4M
Using extracellular metabolites to understand and revert protumoral effects of Tumor-Associated MacrophagesR00CA191021 · NCI · NEW YORK UNIVERSITY · PI CARMONA-FONTAINE, CARLOS · 2017 to 2019
$747k
Using extracellular metabolites to understand and revert protumoral effects of Tumor-Associated MacrophagesK99CA191021 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI CARMONA-FONTAINE, CARLOS · 2015 to 2016
$272k
NCI NIH HHS K99 CA191021NCI NIH HHS P30 CA008748NCI NIH HHS R00 CA191021NIDDK NIH HHS R01 DK096239NIGMS NIH HHS T32 GM008539
6 · The paper itself

Abstract

Most rapidly proliferating mammalian cells rely on the oxidation of exogenous glutamine to support cell proliferation. We previously found that culture of mouse embryonic stem cells (ESCs) in the presence of inhibitors against MEK and GSK3β to maintain pluripotency reduces cellular reliance on glutamine for tricarboxylic acid (TCA) cycle anaplerosis, enabling ESCs to proliferate in the absence of exogenous glutamine. Here we show that reduced dependence on exogenous glutamine is a generalizable feature of pluripotent stem cells. Enhancing self-renewal, through either overexpression of pluripotency-associated transcription factors or altered signal transduction, decreases the utilization of glutamine-derived carbons in the TCA cycle. As a result, cells with the highest potential for self-renewal can be enriched by transient culture in glutamine-deficient media. During pluripotent cell culture or reprogramming to pluripotency, transient glutamine withdrawal selectively leads to the elimination of non-pluripotent cells. These data reveal that reduced dependence on glutamine anaplerosis is an inherent feature of self-renewing pluripotent stem cells and reveal a simple, non-invasive mechanism to select for mouse and human pluripotent stem cells within a heterogeneous population during both ESC passage and induced pluripotent cell reprogramming.

Indexed as

AnimalsCell DifferentiationCellular ReprogrammingGlutamineHumansMiceMouse Embryonic Stem CellsPluripotent Stem CellsGlutamine

Identifiers

PMID31511848
PMCPMC6737941
OpenAlexW2957150415

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.