Evidence map›Paper›PMID 31511626›Full record

ArticleScientific reports2019

A multi-omics analysis of the grapevine pathogen Lasiodiplodia theobromae reveals that temperature affects the expression of virulence- and pathogenicity-related genes.

Carina Félix, Rodrigo Meneses, Micael F M Gonçalves, Laurentijn Tilleman, Ana S Duarte, Jesus V Jorrín-Novo, Yves Van de Peer, Dieter Deforce, Filip Van Nieuwerburgh, Ana C Esteves and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 72 citations in OpenAlex.

  1. Whole genome ofMicrobiology resource announcements · 2026
    Article
  2. Proteomic analysis of rose apple reveals defense proteins activated during Lasiodiplodia theobromae infection.International microbiology : the official journal of the Spanish Society for Microbiology · 2026
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  11. LtGAPR1 Is a Novel Secreted Effector fromJournal of fungi (Basel, Switzerland) · 2023
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  12. Review
  13. Unveiling the Secretome of the Fungal Plant PathogenJournal of fungi (Basel, Switzerland) · 2022
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  16. Genome Analyses of Two Blueberry Pathogens:Journal of fungi (Basel, Switzerland) · 2022
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  18. A Putative Effector LtCSEP1 fromPlants (Basel, Switzerland) · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 4 countries.

Carina FélixDepartment of Biology, CESAM, University of Aveiro, Campus Universitário de Santiago, 3810-193, Aveiro, Portugal.
Rodrigo MenesesDepartment of Biology, CESAM, University of Aveiro, Campus Universitário de Santiago, 3810-193, Aveiro, Portugal.ORCID http://orcid.org/0000-0002-1632-1752
Micael F M GonçalvesDepartment of Biology, CESAM, University of Aveiro, Campus Universitário de Santiago, 3810-193, Aveiro, Portugal.ORCID http://orcid.org/0000-0003-2295-3374
Laurentijn TillemanLaboratory of Pharmaceutical Biotechnology, Ghent University, Ottergemsesteenweg 460, B-9000, Ghent, Belgium.ORCID http://orcid.org/0000-0001-7584-1179
Ana S DuarteDepartment of Biology, CESAM, University of Aveiro, Campus Universitário de Santiago, 3810-193, Aveiro, Portugal.
Jesus V Jorrín-NovoAgroforestry and Plant Biochemistry, Proteomics and Systems Biology, Department of Biochemistry and Molecular Biology, Universidad de Córdoba, Córdoba, Spain.
Yves Van de PeerDepartment of Plant Biotechnology and Bioinformatics, Ghent University, 9052, Ghent, Belgium.
Dieter DeforceLaboratory of Pharmaceutical Biotechnology, Ghent University, Ottergemsesteenweg 460, B-9000, Ghent, Belgium.ORCID http://orcid.org/0000-0002-0635-661X
Filip Van NieuwerburghLaboratory of Pharmaceutical Biotechnology, Ghent University, Ottergemsesteenweg 460, B-9000, Ghent, Belgium.ORCID http://orcid.org/0000-0001-8815-5485
Ana C EstevesDepartment of Biology, CESAM, University of Aveiro, Campus Universitário de Santiago, 3810-193, Aveiro, Portugal.ORCID http://orcid.org/0000-0003-2239-2976
Artur AlvesDepartment of Biology, CESAM, University of Aveiro, Campus Universitário de Santiago, 3810-193, Aveiro, Portugal. artur.alves@ua.pt.ORCID http://orcid.org/0000-0003-0117-2958
Ghent University · BEUniversity of Aveiro · PTPolytechnic Institute of Viseu · PTUniversity of Córdoba · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lasiodiplodia theobromae (Botryosphaeriaceae, Ascomycota) is a plant pathogen and human opportunist whose pathogenicity is modulated by temperature. The molecular effects of temperature on L. theobromae are mostly unknown, so we used a multi-omics approach to understand how temperature affects the molecular mechanisms of pathogenicity. The genome of L. theobromae LA-SOL3 was sequenced (Illumina MiSeq) and annotated. Furthermore, the transcriptome (Illumina TruSeq) and proteome (Orbitrap LC-MS/MS) of LA-SOL3 grown at 25 °C and 37 °C were analysed. Proteins related to pathogenicity (plant cell wall degradation, toxin synthesis, mitogen-activated kinases pathway and proteins involved in the velvet complex) were more abundant when the fungus grew at 25 °C. At 37 °C, proteins related to pathogenicity were less abundant than at 25 °C, while proteins related to cell wall organisation were more abundant. On the other hand, virulence factors involved in human pathogenesis, such as the SSD1 virulence protein, were expressed only at 37 °C. Taken together, our results showed that this species presents a typical phytopathogenic molecular profile that is compatible with a hemibiotrophic lifestyle. We showed that L. theobromae is equipped with the pathogenesis toolbox that enables it to infect not only plants but also animals.

Indexed as

Gene Expression Regulation, FungalTemperatureAscomycotaFungal ProteinsGene Expression ProfilingHumansPlant DiseasesProteomicsVirulenceVirulence FactorsVitisFungal ProteinsVirulence Factors

Identifiers

PMID31511626
PMCPMC6739476
OpenAlexW2972575309

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.