Evidence map›Paper›PMID 31511582›Full record

ArticleScientific reports2019

DMBT1 inhibition of Pseudomonas aeruginosa twitching motility involves its N-glycosylation and cannot be conferred by the Scavenger Receptor Cysteine-Rich bacteria-binding peptide domain.

Jianfang Li, Stephanie J Wan, Matteo M E Metruccio, Sophia Ma, Kamran Nazmi, Floris J Bikker, David J Evans, Suzanne M J Fleiszig

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 19 citations in OpenAlex.

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  8. Nerve-associated transient receptor potential ion channels can contribute to intrinsic resistance to bacterial adhesion in vivo.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Jianfang LiSchool of Optometry, University of California, Berkeley, CA, USA.
Stephanie J WanVision Science Graduate Group, University of California, Berkeley, CA, USA.
Matteo M E MetruccioSchool of Optometry, University of California, Berkeley, CA, USA.
Sophia MaSchool of Optometry, University of California, Berkeley, CA, USA.
Kamran NazmiDepartment of Oral Biochemistry, Academic Centre for Dentistry Amsterdam, Free University of Amsterdam and University of Amsterdam, Amsterdam, The Netherlands.
Floris J BikkerDepartment of Oral Biochemistry, Academic Centre for Dentistry Amsterdam, Free University of Amsterdam and University of Amsterdam, Amsterdam, The Netherlands.
David J EvansSchool of Optometry, University of California, Berkeley, CA, USA.
Suzanne M J FleiszigSchool of Optometry, University of California, Berkeley, CA, USA. fleiszig@berkeley.edu.
University of California, Berkeley · USAcademic Center for Dentistry Amsterdam · NLUniversity of Amsterdam · NL

Funding

Translational Research Center to Expedite Novel Therapies in Cystic FibrosisP30DK089507 · NIDDK · SEATTLE CHILDREN'S HOSPITAL · PI Sonya Heltshe · 2010 to 2026
$21.4M
TRAINING PROGRAM IN VISION SCIENCET32EY007043 · NEI · UNIVERSITY OF CALIFORNIA BERKELEY · PI Suzanne MJ FLEISZIG · 1985 to 2026
$12.9M
Corneal Infection: Role of Bacterial AdaptationR01EY024060 · NEI · UNIVERSITY OF CALIFORNIA BERKELEY · PI FLEISZIG, SUZANNE MJ · 2014 to 2018
$2.0M
CONTROL OF MOUSE RETINAL CELL POPULATIONS: RODS &CONESF32EY007043 · NEI · UNIVERSITY OF TENNESSEE HEALTH SCI CTR · PI AIREY, DAVID C · 2000 to 2000
$31k
NEI NIH HHS F32 EY007043NEI NIH HHS R01 EY024060NEI NIH HHS T32 EY007043NIDDK NIH HHS P30 DK089507
6 · The paper itself

Abstract

The scavenging capacity of glycoprotein DMBT1 helps defend mucosal epithelia against microbes. DMBT1 binding to multiple bacterial species involves its conserved Scavenger Receptor Cysteine-Rich (SRCR) domains, localized to a 16-mer consensus sequence peptide, SRCRP2. Previously, we showed that DMBT1 bound Pseudomonas aeruginosa pili, and inhibited twitching motility, a pilus-mediated movement important for virulence. Here, we determined molecular characteristics required for twitching motility inhibition. Heat-denatured DMBT1 lost capacity to inhibit twitching motility and showed reduced pili binding (~40%). Size-exclusion chromatography of Lys-C-digested native DMBT1 showed that only high-Mw fractions retained activity, suggesting involvement of the N-terminal containing repeated SRCR domains with glycosylated SRCR-Interspersed Domains (SIDs). However, individual or pooled consensus sequence peptides (SRCRPs 1 to 7) showed no activity and did not bind P. aeruginosa pili; nor did recombinant DMBT1 (aa 1-220) or another SRCR-rich glycoprotein, CD163. Enzymatic de-N-glycosylation of DMBT1, but not de-O-glycosylation, reduced its capacity to inhibit twitching motility (~57%), without reducing pili binding. Therefore, DMBT1 inhibition of P. aeruginosa twitching motility involves its N-glycosylation, its pili-binding capacity is insufficient, and it cannot be conferred by the SRCR bacteria-binding peptide domain, either alone or mixed with other unlinked SRCRPs, suggesting an additional mechanism for DMBT1-mediated mucosal defense.

Indexed as

Antigens, CDAntigens, Differentiation, MyelomonocyticBacteriaCalcium-Binding ProteinsCD163 AntigenCysteineDNA-Binding ProteinsFimbriae, BacterialGlycosylationHot TemperatureHumansPeptidesProtein BindingProtein DenaturationProtein DomainsPseudomonas aeruginosaAntigens, CDAntigens, Differentiation, MyelomonocyticCalcium-Binding ProteinsCD163 AntigenCysteineDMBT1 protein, humanDNA-Binding ProteinsPeptidesReceptors, Cell SurfaceReceptors, ScavengerTumor Suppressor Proteins

Identifiers

PMID31511582
PMCPMC6739395
OpenAlexW2972493854

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.