Evidence map›Paper›PMID 31511569›Full record

ArticleScientific reports2019

Comparative metabolomics of MCF-7 breast cancer cells using different extraction solvents assessed by mass spectroscopy.

Mohammad H Semreen, Hasan Y Alniss, Stefan R Grgic, Raafat A El-Awady, Ahmed H Almehdi, Muath K Mousa, Rifat A Hamoudi

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. The FGF-21 genetic variantsJournal of advanced research · 2020
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Mohammad H SemreenCollege of Pharmacy, University of Sharjah, P.O. Box 27272, Sharjah, United Arab Emirates. msemreen@sharjah.ac.ae.
Hasan Y AlnissCollege of Pharmacy, University of Sharjah, P.O. Box 27272, Sharjah, United Arab Emirates.
Stefan R GrgicSharjah Institute for Medical Research, University of Sharjah, P.O. Box 27272, Sharjah, United Arab Emirates.
Raafat A El-AwadyCollege of Pharmacy, University of Sharjah, P.O. Box 27272, Sharjah, United Arab Emirates.
Ahmed H AlmehdiDepartment of Chemistry, College of Sciences, University of Sharjah, P.O. Box 27272, Sharjah, United Arab Emirates.
Muath K MousaResearch Institute of Science and Engineering, University of Sharjah, P.O. Box 27272, Sharjah, United Arab Emirates.
Rifat A HamoudiSharjah Institute for Medical Research, University of Sharjah, P.O. Box 27272, Sharjah, United Arab Emirates. rhamoudi@sharjah.ac.ae.
University of Sharjah · AEUniversity of Novi Sad · RS

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Metabolic profiling of cancer cells can play a vital role in revealing the molecular bases of cancer development and progression. In this study, gas chromatography coupled with mass spectrometry (GC-MS) was employed for the determination of signatures found in ER+/PR+ breast cancer cells derived from MCF-7 using different extraction solvents including: A, formic acid in water; B, ammonium hydroxide in water; C, ethyl acetate; D, methanol: water (1:1, v/v); and E, acetonitrile: water (1:1, v/v). The greatest extraction rate and diversity of metabolites occurs with extraction solvents A and E. Extraction solvent D showed moderate extraction efficiency, whereas extraction solvent B and C showed inferior metabolite diversity. Metabolite set enrichment analysis (MSEA) results showed energy production pathways to be key in MCF-7 cell lines. This study showed that mass spectrometry could identify key metabolites associated with cancers. The highest enriched pathways were related to energy production as well as Warburg effect pathways, which may shed light on how energy metabolism has been hijacked to encourage tumour progression and eventually metastasis in breast cancer.

Indexed as

MetabolomeAcetonitrilesBreast NeoplasmsFemaleFormatesGas Chromatography-Mass SpectrometryHumansLiquid-Liquid ExtractionMCF-7 CellsMethanolSolventsWateracetonitrileAcetonitrilesFormatesformic acidMethanolSolventsWater

Identifiers

PMID31511569
PMCPMC6739366
OpenAlexW2972922183

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.