Evidence map›Paper›PMID 31511554›Full record

ArticleScientific reports2019

A genome-wide screen for human salicylic acid (SA)-binding proteins reveals targets through which SA may influence development of various diseases.

Hyong Woo Choi, Lei Wang, Adrian F Powell, Susan R Strickler, Dekai Wang, D'Maris A Dempsey, Frank C Schroeder, Daniel F Klessig

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
1.1field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it, 18 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Article
  5. On the human health benefits of microalgal phytohormones: An explorativeComputational and structural biotechnology journal · 2023
    Article
  6. New Horizons in Plant Cell Signaling.International journal of molecular sciences · 2022
    Article
  7. Amoxicillin Haptenation ofFrontiers in pharmacology · 2021
    Article
  8. Natural Salicylates and Their Roles in Human Health.International journal of molecular sciences · 2020
    Review
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Hyong Woo ChoiBoyce Thompson Institute, Ithaca, New York, 14853, USA.ORCID http://orcid.org/0000-0001-6049-4426
Lei WangBoyce Thompson Institute, Ithaca, New York, 14853, USA.
Adrian F PowellBoyce Thompson Institute, Ithaca, New York, 14853, USA.
Susan R StricklerBoyce Thompson Institute, Ithaca, New York, 14853, USA.
Dekai WangBoyce Thompson Institute, Ithaca, New York, 14853, USA.
D'Maris A DempseyBoyce Thompson Institute, Ithaca, New York, 14853, USA.
Frank C SchroederBoyce Thompson Institute, Ithaca, New York, 14853, USA.
Daniel F KlessigBoyce Thompson Institute, Ithaca, New York, 14853, USA. dfk8@cornell.edu.ORCID http://orcid.org/0000-0002-1315-5920
Cornell University · USGyeongguk National University · KRZhejiang Sci-Tech University · CN

Funding

Acquisition of a Hybrid Quadrupole Time of Flight LC-MS/MS System for the CornellS10OD017992 · OD · CORNELL UNIVERSITY · PI ZHANG, SHENG · 2014 to 2014
$600k
NIH HHS S10 OD017992
6 · The paper itself

Abstract

Salicylic acid (SA) is the major metabolite and active ingredient of aspirin; both compounds reduce pain, fever, and inflammation. Despite over a century of research, aspirin/SA's mechanism(s) of action is still only partially understood. Here we report the results of a genome-wide, high-throughput screen to identify potential SA-binding proteins (SABPs) in human HEK293 cells. Following photo-affinity crosslinking to 4-azidoSA and immuno-selection with an anti-SA antibody, approximately 2,000 proteins were identified. Among these, 95 were enriched more than 10-fold. Pathway enrichment analysis with these 95 candidate SABPs (cSABPs) revealed possible involvement of SA in multiple biological pathways, including (i) glycolysis, (ii) cytoskeletal assembly and/or signaling, and (iii) NF-κB-mediated immune signaling. The two most enriched cSABPs, which corresponded to the glycolytic enzymes alpha-enolase (ENO1) and pyruvate kinase isozyme M2 (PKM2), were assessed for their ability to bind SA and SA's more potent derivative amorfrutin B1 (amoB1). SA and amoB1 bound recombinant ENO1 and PKM2 at low millimolar and micromolar concentrations, respectively, and inhibited their enzymatic activities in vitro. Consistent with these results, low millimolar concentrations of SA suppressed glycolytic activity in HEK293 cells. To provide insights into how SA might affect various human diseases, a cSABP-human disorder/disease network map was also generated.

Indexed as

DiseaseGenomicsGlycolysisHEK293 CellsHumansProteinsSalicylic AcidProteinsSalicylic Acid

Identifiers

PMID31511554
PMCPMC6739329
OpenAlexW2973229522

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.