Evidence map›Paper›PMID 31511530›Full record

ArticleNature communications2019

Circadian control of lung inflammation in influenza infection.

Shaon Sengupta, Soon Y Tang, Jill C Devine, Seán T Anderson, Soumyashant Nayak, Shirley L Zhang, Alex Valenzuela, Devin G Fisher, Gregory R Grant, Carolina B López and 1 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 99 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
99citing papers in PubMed, 1 pooled it
8.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

99 citing papers in PubMed, 1 synthesis or guideline pooled it, 146 citations in OpenAlex.

  1. Pooled it
  2. Article
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  5. Review
  6. Article
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  15. The βScience advances · 2025
    Article
  16. Article
  17. Review
  18. Review
  19. Circadian metabolic adaptations to infections.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Review
  20. Chronic CRYPTOCHROME deficiency enhances cell-intrinsic antiviral defences.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Article

39 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Shaon SenguptaDepartment of Pediatrics, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA, 19104, USA. SenguptaS@email.chop.edu.
Soon Y TangInstitute of Translational Medicine and Therapeutics, University of Pennsylvania, Philadelphia, PA, 19104, USA.
Jill C DevineInstitute of Translational Medicine and Therapeutics, University of Pennsylvania, Philadelphia, PA, 19104, USA.
Seán T AndersonInstitute of Translational Medicine and Therapeutics, University of Pennsylvania, Philadelphia, PA, 19104, USA.ORCID http://orcid.org/0000-0003-1805-2485
Soumyashant NayakInstitute of Translational Medicine and Therapeutics, University of Pennsylvania, Philadelphia, PA, 19104, USA.
Shirley L ZhangDepartment of Neuroscience, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA, 19104, USA.ORCID http://orcid.org/0000-0002-6672-2044
Alex ValenzuelaUniversity of Pennsylvania Veterinary School, Philadelphia, PA, 19104, USA.
Devin G FisherUniversity of Pennsylvania Veterinary School, Philadelphia, PA, 19104, USA.
Gregory R GrantInstitute of Translational Medicine and Therapeutics, University of Pennsylvania, Philadelphia, PA, 19104, USA.
Carolina B LópezInstitute of Translational Medicine and Therapeutics, University of Pennsylvania, Philadelphia, PA, 19104, USA.ORCID http://orcid.org/0000-0002-7669-6572
Garret A FitzGeraldInstitute of Translational Medicine and Therapeutics, University of Pennsylvania, Philadelphia, PA, 19104, USA.
Translational Therapeutics (United States) · USUniversity of Pennsylvania · US

Funding

Pediatric Scholars ProgramK12HD043245 · NICHD · CHILDREN'S HOSP OF PHILADELPHIA · PI ST. GEME, JOSEPH W. · 2003 to 2022
$7.4M
Defective Viral genomes in RSV pathogenesisR01AI137062 · NIAID · WASHINGTON UNIVERSITY · PI Carolina B. Lopez · 2018 to 2026
$4.2M
Mechanisms of DDO AdjuvancyR01AI134862 · NIAID · WASHINGTON UNIVERSITY · PI LOPEZ, CAROLINA B. · 2018 to 2022
$2.4M
Role of Circadian Clock in Lung InflammationK08HL132053 · NHLBI · CHILDREN'S HOSP OF PHILADELPHIA · PI SENGUPTA, SHAON · 2017 to 2020
$638k
NHLBI NIH HHS K08 HL132053NIAID NIH HHS R01 AI134862NIAID NIH HHS R01 AI137062NICHD NIH HHS K12 HD043245
6 · The paper itself

Abstract

Influenza is a leading cause of respiratory mortality and morbidity. While inflammation is essential for fighting infection, a balance of anti-viral defense and host tolerance is necessary for recovery. Circadian rhythms have been shown to modulate inflammation. However, the importance of diurnal variability in the timing of influenza infection is not well understood. Here we demonstrate that endogenous rhythms affect survival in influenza infection. Circadian control of influenza infection is mediated by enhanced inflammation as proven by increased cellularity in bronchoalveolar lavage (BAL), pulmonary transcriptomic profile and histology and is not attributable to viral burden. Better survival is associated with a time dependent preponderance of NK and NKT cells and lower proportion of inflammatory monocytes in the lung. Further, using a series of genetic mouse mutants, we elucidate cellular mechanisms underlying circadian gating of influenza infection.

Indexed as

AnimalsAntigens, LyARNTL Transcription FactorsCircadian RhythmFemaleInfluenza A virusMaleMice, Inbred C57BLMice, KnockoutMonocytesMyeloid CellsNatural Killer T-CellsOrthomyxoviridae InfectionsPhenotypePneumoniaTime FactorsAntigens, LyARNTL Transcription FactorsBmal1 protein, mouseLy-6C antigen, mouse

Identifiers

PMID31511530
PMCPMC6739310
OpenAlexW2972673999

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.